Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0312 ATGGCGGAGAAATCATGCATCAAGCGCCTTCAGAAGGAATATAGAGCTCTTTGTAAAGAGCCAGTGCCCCATGTCGTTGCTCGTCCATCACCTAATGATATACTTGAGTGGCATTATGTGTTGGAAGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTATTATGGCAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCCAATGGACGCTTCATTACACAGAAAAAGATCTGCTTGTCCATGAGTGATTTTCATCCAGAAAGTTGGAATCCTATGTGGTCCGTATCAAGCATTCTTACGGGGCTTCTATCCTTCATGGTGGACACCAGTCCAACGACTGGCAGTGTGAGCACTACTACTGAAGAGAAGCATCGTTTAGCAAAATCTTCCCTTTCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCCGAGTATGTTGACAAGTACAACCAGCTGCTTTCAGAGCAGGCTGCCTCCGAACAAACGGCATCTGAGGCGGCATCTCTTGACAAGAGCTCAAGGCCCATGTTGAGAAAAGTTACGGAGTCTACAGGAGAAGTCATGAAAGTAGTAGATGAATTGAAAGAGGTGAGGAAAAACAGAAAGCAATCATTACCCACTTGGATGATGTTGTTGCTCTTTTCCATTTTTGGGCTTATAATGGCATTGCCTCTGCTTCAGCTGTGA 720 0.4389 MAEKSCIKRLQKEYRALCKEPVPHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFITQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMVDTSPTTGSVSTTTEEKHRLAKSSLSFNCKNATFRKMFPEYVDKYNQLLSEQAASEQTASEAASLDKSSRPMLRKVTESTGEVMKVVDELKEVRKNRKQSLPTWMMLLLFSIFGLIMALPLLQL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0312 239 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 137 - -
Mibi04g0312 239 SUPERFAMILY UBC-like 5 155 IPR016135 -
Mibi04g0312 239 CDD UBCc 7 157 IPR000608 -
Mibi04g0312 239 SMART ubc_7 8 162 - -
Mibi04g0312 239 Pfam Ubiquitin-conjugating enzyme 9 123 IPR000608 -
Mibi04g0312 239 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Mibi04g0312 239 FunFam Ubiquitin-conjugating enzyme E2 34 1 178 - -
Mibi04g0312 239 Gene3D Ubiquitin Conjugating Enzyme 1 181 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0312 Mibi-ChrMibi04 5571826 5574205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0312 1 239 Miscellaneous Gene Families AT1G17280 73.750 1.30e-131 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0312 04 5571826 5574205 Mibi04g0312 04 5571826 5574205 ECH