Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0246 ATGTCTTTCTCTGCAACCAAGTTGGTGCAACCCCTTCATCCCAATCCCTCCATTTCTAGATCCAATGATAATAATAATAATAATAATAATCCTCTTTCCTTTCACCCCTCTTCTTTCCTTGGCTCCTTTCACAACCTTCGCTTCAATAATGCTCTTTCTAAGCTTTCTGCTCACAATTCCCGTCGCCGTCATGCCTCTGTTGTTGCTGTTTCCGATGTTGTCAAGCAAAAGAACCCCCAATCCAGCTCCAATCTGCTTATTACGAAAGAGGAGGGCTTGGAGCTCTATGAAGACATGATATTAGGCAGGGCCTTTGAAGACATGTGTGCCCAGATGTATTATAGAGGTAAAATGTTTGGTTTTGTCCACTTGTATAATGGTCAAGAAGCTGTGTCAACTGGATTCATCAAGCTTCTGAAGAAAGAAGATTATGTAGTAAGCACCTACCGGGACCATGTTCATGCACTGAGTAAGGGAGTTCCAGCTCGTGCTGTGATGAGTGAGCTCTTTGGAAAAACTACTGGATGTTGTAGGGGACAGGGTGGATCAATGCACATGTTCTCAAAAGAACACAATTTGCTTGGTGGGTTTGCATTCATTGGTGAAGGGATTCCAATAGCCACTGGGGCTGCGTTTTCTAGTAGGTATAGAAGGGAGGTATTGAAAGAGGCTGATACCTGTGATGTCACATTAGCCTTTTTCGGAGATGGAACATGTAATAATGGGCAATTCTTTGAATGCCTAAACATGGCAGCATTGTGGAAATTGCCAATTGTGTTTGTCGTGGAAAACAATTTGTGGGCTATTGGGATGTCACATCTCAGGGCAACTTCAGATCCTGAGATTTGGAAGAAAGGGCCGGCATTTGGAATGCCAGGGGTTCATGTAGATGGAATGGATGTTTTGAAGGTCAGGGAGGTGGCTAAGGAGGCTATTGAAAGAGCTAGAAGAGGAGATGGGCCAACTTTAGTTGAATGTGAGACCTATAGATTTAGAGGACATTCATTGGCTGATCCTGATGAGCTTCGTGATCCTGCTGAGAAGGCACACTATGCTGGTAGGGATCCTATCTCTGCATTGAAGCAATACATTATTGAGAACAAACTAGCAAATGAGCAGGAATTAAAGGCCATAGAGAAGAAGATTGATGAGGTGATTGAGGACTCTGTTGAATTTGCTGATGAGAGCCCTCTTCCATCTCGAAGCCAGCTTCTGGAGAATGTGTTTGCTGATCCAAAAGGTTTTGGAATTGGACCAGATGGAAAGTATAGGTGCGAAGATCCTAAATTCACCGAAGGCACCGCTCATGTTTAG 1314 0.4376 MSFSATKLVQPLHPNPSISRSNDNNNNNNNPLSFHPSSFLGSFHNLRFNNALSKLSAHNSRRRHASVVAVSDVVKQKNPQSSSNLLITKEEGLELYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDYVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPIATGAAFSSRYRREVLKEADTCDVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGDGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPISALKQYIIENKLANEQELKAIEKKIDEVIEDSVEFADESPLPSRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAHV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0246 437 Coils Coil 368 388 - -
Mibi04g0246 437 CDD TPP_E1_PDC_ADC_BCADC 95 393 - -
Mibi04g0246 437 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 64 420 - -
Mibi04g0246 437 FunFam Pyruvate dehydrogenase E1 component subunit alpha 55 418 - -
Mibi04g0246 437 Pfam Dehydrogenase E1 component 99 399 IPR001017 GO:0016624
Mibi04g0246 437 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 87 412 IPR029061 -
Mibi04g0246 437 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 89 410 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mibi04g0246 437 MobiDBLite consensus disorder prediction 1 31 - -
Mibi04g0246 437 Gene3D - 42 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0246 Mibi-ChrMibi04 4410978 4414234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0246 2 437 Acyl Lipid Metabolism Gene Families AT1G01090 78.588 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0246 04 4410978 4414234 Mibi04g0246 04 4410978 4414234 ECH