Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0244 ATGGCAGTGCTGAGTGCTTCAAGTAATTTGGTATCCAGAAGTGCTCATGTCAATCATGGACCATCTCTTTCATCTGATACCAAAGTCAGTTCGGTTGGAATGAGGTTTTTAAAGCAGACAAATACCCATAATGGACTAAGAATTTTGAACCCAGTGGATGAGCTGCTGGAAAGCACTTCAATAAAAGCTAGTGCACGGCAGGCTAGGAGGACAAAGGTTTTTAAATGCAAGGACAAGAAGCCTTCAGATGCCATCATATGTGGCATGAATTTGATCTTTGTGGGAACTGAGGTTGGTCCATGGAGCAAAACTGGAGGGCTTGGGGATGTTCTTGGAGGTCTCCCACCGGCAATGGCAGCTAATGGGCACCGAGTTATGACCATAGCTCCACGTTACGACCAGTACAAAGATGCATGGGATACAGATGTTGCAATTGAGGTAAAATTAGGAGACAGAGTTGAAAAAGTTCGCTTCTTCCATTGCTACAAAAGAGGAGTTGACCGTGTCTTTGTGGATCACCCAATGTTCCTTGAAAAGGTGTGGGGAAAAACTGGAACCAAATTGTATGGACCATTGGCAGGAGAGGATTATGAGGATAACCAACTACGCTTCAGCTTATTCTGCCAGGCAGTTTTGGAAGCACCAAGGGTTCTGAATCTGAACAGCAATAGTTATTTCTCTGGACCATATGGTGAAGATGTCATATTCATTGCCAATGATTGGCACACTGCCCTTATTCCCTGCTACTTAAAATCTATGTACAAGCCATTTGGTATCTATAAGAATGCCCAAGTTGTTTTCTGTATCCACAACATTGCTTACCAAGGCAGATTTGCATTTGATGATTTTTCACTTCTCAGTCTTCCCAGTCAGTTTAGAAGCTCCTTCGACTTCATTGATGGGCATGTTAAACCAGTGATAGGAAGGAAAATAAATTGGATGAAAGCTGGAATTCTCGAATCAAGCCTGGTGTTAACTGTTAGTCCATATTATGCCATTGAACTTGCTTCTGGTGTTGAAAAGGGAGTGGAGTTGGATCATGTCATTCGCAGGACTGGCATTATCGGAATCATCAATGGCATGGATGTCCAGGAGTGGAATCCATCTGCTGACAAATACATAAACGTCAAATACGACGCTTCAACTGTATTGACAGCAAAGCCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCAGTAGACAGAGATGTTCCTCTCATTGTTTTCATTGGTAGGCTTGAAGAGCAGAAAGGTTCTGATATTCTTGTGGAAGCCATCCCCCAATTCATCGGCGAGAATGTTCAGCTAGTAGCCCTTGGAACAGGTAAGAAACAAATGGAAAAGCAGCTTCAGCAGTTGGAGACATTGTACCCTGACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCCCTTAGCCCATATGATGATAGCTGGTGCTGATTATATATTGGTCCCTAGTAGATTTGAACCTTGTGGTCTCATACAACTGCAAGCCATGCGATATGGAACTGTACCTATAGTTGCCTCAACCGGTGGATTAGTGGATACAGTGAAGGAAGGTTTCACAGGATTTCAGATGGGTCCCTTCAATGTTGAATGTGAAGCTGTAGATCCTGCAGATGCAGCTGCTCTGGCTAGCAATGTCAAAAGGGCTCTTAATGTTTATGGAACTCCCGCTTTGACAGAAATGATCAGGAATTGTATGGCTCAAGATCTTTCATGGAAGGGGCCTGCCAAGAAGTGGGAGGAGGTTTTGCTTAGCTTGGGAGTTGCAGGAAGTGAGCCTGGGATTGATGGAGAAGAAATTGCTCCACAAGCAAAGGAAAACGTGGCAACTCCTTAA 1848 0.4394 MAVLSASSNLVSRSAHVNHGPSLSSDTKVSSVGMRFLKQTNTHNGLRILNPVDELLESTSIKASARQARRTKVFKCKDKKPSDAIICGMNLIFVGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTIAPRYDQYKDAWDTDVAIEVKLGDRVEKVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGTKLYGPLAGEDYEDNQLRFSLFCQAVLEAPRVLNLNSNSYFSGPYGEDVIFIANDWHTALIPCYLKSMYKPFGIYKNAQVVFCIHNIAYQGRFAFDDFSLLSLPSQFRSSFDFIDGHVKPVIGRKINWMKAGILESSLVLTVSPYYAIELASGVEKGVELDHVIRRTGIIGIINGMDVQEWNPSADKYINVKYDASTVLTAKPLLKEALQAEVGLPVDRDVPLIVFIGRLEEQKGSDILVEAIPQFIGENVQLVALGTGKKQMEKQLQQLETLYPDKARGVAKFNVPLAHMMIAGADYILVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGPFNVECEAVDPADAAALASNVKRALNVYGTPALTEMIRNCMAQDLSWKGPAKKWEEVLLSLGVAGSEPGIDGEEIAPQAKENVATP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0244 615 Gene3D Glycogen Phosphorylase B; 362 572 - -
Mibi04g0244 615 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 54 594 - -
Mibi04g0244 615 Hamap Glycogen synthase [glgA]. 89 590 IPR011835 GO:0004373
Mibi04g0244 615 FunFam Starch synthase, chloroplastic/amyloplastic 367 572 - -
Mibi04g0244 615 Pfam Glycosyl transferases group 1 403 532 IPR001296 GO:0016757
Mibi04g0244 615 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 89 588 IPR011835 GO:0004373
Mibi04g0244 615 Pfam Starch synthase catalytic domain 91 350 IPR013534 -
Mibi04g0244 615 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 587 - -
Mibi04g0244 615 CDD GT5_Glycogen_synthase_DULL1-like 90 589 - -
Mibi04g0244 615 Gene3D Glycogen Phosphorylase B; 91 581 - -
Mibi04g0244 615 FunFam Starch synthase, chloroplastic/amyloplastic 90 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0244 Mibi-ChrMibi04 4404753 4408478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0244 1 615 Glycosyltransferase AT1G32900 69.741 0.0 866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0244 04 4404753 4408478 Mibi04g0244 04 4404753 4408478 ECH