Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0210 ATGCCTGGTCTAGTTTCAGTGAAAACCTCGCCTCATACGACGCCGTTTGGGGCCGAACAAAGACCTTCTTCCCCAATCGTGAAGAAACGAAGCTCAAAGAAGTCACAGGAAACCCTAATCACCGAAGATTCCTCACTCGACAACACAGATTTAGGTCAATTCCTTCTGAAGCAAGCTCGTGACGCCATAGCTTCAGGCGATAACCCGAACAAGGCGTTGGATCTCGCGATTCGGGCGGCCAAATCGCTCGAGTCGGGTTCGGGTTCGGATCCGGAGCTTGCCACGTGTCTGCACGTTGTGGCGGCGATTTACTGTAGTTTGGGGCGATTCGGGGAGGCGATTCATGAGTTGGAGCGGGCGATTGAGATTCCGGATCCTAAAAACGGGTCGGGTCATGGTATGGTGAAGTTTTCTGGGTATATGCAGTTAGGGGATACGTATTCGATGATTGGGCAGCTTCAACGTTCGATTAAGTGTTATGGGTCGGGTTTGAAGATCCAAATGGAGGCTTTGGGAAAGTCCGACCCAAGAGTTTCAGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCTATGCAGTTTGATGAGGCAGAGAATTTCTGCAAGAAGGCTCTTGAAATTCATAGGGAGCATAGCTCCCCAGCGTCCCTTCCTGAAGCAGCTGATCGGCGCCTTATGGCTCTCATATGTGATGCAAAGGGAGATTATGAAGCAGCACTTGAGCACCTTGTCCTGGCTAGCGTATCAATGATTGCCAATGGGCAAGACTATGAGGTTGCAGCTATTGATATTAGCATTGGCGATATTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTCTTTGCCTATCAGAAAGCTCTTACTGTGTTCAAATCCACCCGAAGTGAGAACCATGGTTCTGTTGCGTTAGTTTACATTCGCCTCGCTGACCTTTACTACAAGACAGGAAAATTAAGAGAGTCAAAATCCTACTGTGAAAATGCCCTGAGAATATACAGCAAACCTGTTCTTGGAACCACCCCTGAAGAGATTGCCAGTGGGTTAACTGAAATCTCTGCCATTTATGATGGTCTCAATGAACCTGAAGAGGCACTGAAGCTATTGAAGAAGGCAATGAAGTTATTGGAGGATAACCCTGGACAGTATAGGACGATCGCAGGAATTGAAGCACAAATGGCCGTGATGTTCTACACGGTAGGGAGATTCAAGGAGGCTCAGGATTCTTTTCAGAGTGCTATCACCAAGCTGAGGGCTAGTGGGGAGAGGAACTCTGCTTTTTTCGGCGTTTTGTTGAACCAAATGGGGCTGGCTTGTGTGCAACTCTACAAAATAGAAGAGGCAACCAAACTTTTTGAAGAGGCAAGAGAGATATTGGAGCAGGAGTGTGGGACATATCATTTGGACACTCTAGGAGTGTACAGCAACCTTGCAGCAACTTATGATGCTATAGGGAGGGTTGATGATGCAATTGAGATATTGGAGCAGATACTGAAGATGAGAGAAGAAAAGCTTGGAACGGCAAATCCAGATGTTGATGATGAAAAGAAAAGACTATATGAGCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAAAAAGGGAAAATCCCTTGAAAATCTTATAGATTCCAACTTTCTAAAGATGAAGAAGGAAGGAAGAAAGGGAAGGACTACATTTGGTTTGAGAACTTGA 1692 0.4616 MPGLVSVKTSPHTTPFGAEQRPSSPIVKKRSSKKSQETLITEDSSLDNTDLGQFLLKQARDAIASGDNPNKALDLAIRAAKSLESGSGSDPELATCLHVVAAIYCSLGRFGEAIHELERAIEIPDPKNGSGHGMVKFSGYMQLGDTYSMIGQLQRSIKCYGSGLKIQMEALGKSDPRVSETCRYLAEAHVQAMQFDEAENFCKKALEIHREHSSPASLPEAADRRLMALICDAKGDYEAALEHLVLASVSMIANGQDYEVAAIDISIGDIYLSLCRFDEAVFAYQKALTVFKSTRSENHGSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKPVLGTTPEEIASGLTEISAIYDGLNEPEEALKLLKKAMKLLEDNPGQYRTIAGIEAQMAVMFYTVGRFKEAQDSFQSAITKLRASGERNSAFFGVLLNQMGLACVQLYKIEEATKLFEEAREILEQECGTYHLDTLGVYSNLAATYDAIGRVDDAIEILEQILKMREEKLGTANPDVDDEKKRLYELLKEAGRVRNKKGKSLENLIDSNFLKMKKEGRKGRTTFGLRT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0210 563 Pfam MalT-like TPR region 71 259 IPR041617 -
Mibi04g0210 563 Pfam Tetratricopeptide repeat 260 334 - -
Mibi04g0210 563 Pfam Tetratricopeptide repeat 431 503 - -
Mibi04g0210 563 ProSiteProfiles TPR repeat profile. 346 379 IPR019734 GO:0005515
Mibi04g0210 563 SUPERFAMILY TPR-like 90 508 IPR011990 GO:0005515
Mibi04g0210 563 MobiDBLite consensus disorder prediction 1 44 - -
Mibi04g0210 563 Gene3D Tetratricopeptide repeat domain 39 246 IPR011990 GO:0005515
Mibi04g0210 563 ProSiteProfiles TPR repeat profile. 261 294 IPR019734 GO:0005515
Mibi04g0210 563 Coils Coil 359 379 - -
Mibi04g0210 563 SMART tpr_5 471 504 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 179 212 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 387 420 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 261 294 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 94 128 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 137 170 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 429 462 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 303 336 IPR019734 GO:0005515
Mibi04g0210 563 SMART tpr_5 346 379 IPR019734 GO:0005515
Mibi04g0210 563 Gene3D Tetratricopeptide repeat domain 422 543 IPR011990 GO:0005515
Mibi04g0210 563 Gene3D Tetratricopeptide repeat domain 247 421 IPR011990 GO:0005515
Mibi04g0210 563 ProSiteProfiles TPR repeat profile. 471 504 IPR019734 GO:0005515
Mibi04g0210 563 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 28 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0210 Mibi-ChrMibi04 3788106 3792617 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0210 04 3788106 3792617 Mibi04g0210 04 3788106 3792617 ECH