Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1804 ATGCAATCGAGTTACATGATTACTCCCACAGTTGTCACACTCACAGTAATCGTGGTCTTGTACTTTGAGATGGGTGTTGTTACTGTTGCTGAATTGAAGCCCAGTATTTCAGGGAAGAGGACCTTTCGTCCAAATTCAAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTCTCTAGCGATCTTACCGTTGAGATTGGAGCATCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTAAAAGTGGGAGAATTCGGAAACTGTTGTTAGAAGCGAAAGATTCAAAGGCCTCACGCATAAATCTCCCAATTGTGCCTGGTGGAGGAGATGCATTTGAGCTAGCTGCTAAGTTCTGCTATGGAATTAATGTTGAGCTCACTCTCTCAAACGTGGCTATGCTACGTTGTGTTGCCCATTTCTTGGAAATGACTGAAGAATATGCTGAGAAAAACTTGGAGACTCGAGCTGAAGCATATCTAAAGGAGACAGTGCTGCCAAACATTTCAAGCTCAATATCTGTACTTCATCGCTGTGAATTGCTCTTGCCTGTTGCAGAAGAGATCAACCTTGTGAACAGGCTTATCAATGGAATAGCAAATAATGCCTGCAAAGAGCAGCTTACTTCTGGCTTGCTGAAACTTGACCATAATTTTCCCTCTAAAACCATCTCAATTATGGAACCAGAAACACCTTCTGATTGGTGGGGGAAATCTCTCAATGCTCTTAACCTTGATTTCTTCCAACGAGTCCTTTCTGTAATGAAGTCAAAGGGACTAAAACAGGACATGATCAGCAAGATTCTGATAAACTACGCGCATAATTCTCTTCAAGGGATTGTTGTTAGGGACCCCAAAGTTGTGAAGGGAAGTTCACTGGACTTAGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAGCCATTGTTGGCTTACTCCCAACTCAGTCAAGGAAGAGTCCAGTTCCAATGGCGTTTCTATCAAGTTTGCTGAAAGCTGCAATAGCAGCATCGGCATCAACTTCTTGTAGGTCTGATTTGGAGAGGAGAATGGGTCTTCAACTTGACCAGGCAATTCTTGAAGACATCCTAATTCCTGCAACCTCAGGCTTGAATTCCCACTGTACAATGTATGACACTGATTCAATTCTCAGGATCTTTTCCATTTTCCTAAACTTGGATGAGGAAGATGAGGATGATAATAATAATCACTTGAGGGATGAGAGTGAAATGGTATATGACTTTGACAGCCCCGGATCCCCAAAACAAAGCTCAATTCTGAAGGTGTCTAAGTTGTTAGACAATTACCTTGCTGAAATAGCATTAGACTCAAACTTGCTTCCATCAAAGTTCATAGCACTTGCTGAACTACTCCCAGATCATGCCCGTATTGTAAGTGATGGACTCTATAGATCTGTCGATATCTTCCTAAAGGTTCATCCCAATCTAAAGGACTCAGAGCGCTACCGGCTATGCAAAACCATAGACTGTCAAAAACTGTCCCAAGAAGCTTGCAGCCATGCAGCTCAGAATGAAAGGCTTCCAGTGCAAATGGCAGTGCAAGTGTTGTACTTTGAGCAAATCAGGCTGAGAAACGCCATGAATGGGGGACACAACCAGTTATTCTTTGCAGGTTTCAATGGTCAGTTTCCTCAACGTTCAGGAAGTGGTGCAGGAAGTGGAGCCATTTCCCCAAGAGATAACTATGCATCAGTGAGAAGAGAGAACAGAGAACTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTGACTGATTTGGAAAAAGATCACGTGTCTATGAAGCAAGAGCTTGTGAGGTCTCATCCTGCTAATAAATTATTCAAGTCATTTACTAAAAAGCTTAGCAAGCTCAATTCTTTGTTTCGGATCAACAATATTAAGCCAAATGGAGCAAAAGGTAGTGCTGATAATCGGTTTCCATTTCAAAAGAGAAGGCGTCACTCAGTTTCATGA 1971 0.4226 MQSSYMITPTVVTLTVIVVLYFEMGVVTVAELKPSISGKRTFRPNSSIRHATEWPISDVSSDLTVEIGASSFALHKFPLVSKSGRIRKLLLEAKDSKASRINLPIVPGGGDAFELAAKFCYGINVELTLSNVAMLRCVAHFLEMTEEYAEKNLETRAEAYLKETVLPNISSSISVLHRCELLLPVAEEINLVNRLINGIANNACKEQLTSGLLKLDHNFPSKTISIMEPETPSDWWGKSLNALNLDFFQRVLSVMKSKGLKQDMISKILINYAHNSLQGIVVRDPKVVKGSSLDLELQKKQRVIVEAIVGLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRMGLQLDQAILEDILIPATSGLNSHCTMYDTDSILRIFSIFLNLDEEDEDDNNNHLRDESEMVYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNLLPSKFIALAELLPDHARIVSDGLYRSVDIFLKVHPNLKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQLFFAGFNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLSKLNSLFRINNIKPNGAKGSADNRFPFQKRRRHSVS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1804 656 Gene3D Potassium Channel Kv1.1; Chain A 50 170 IPR011333 -
Mibi02g1804 656 Pfam BTB/POZ domain 60 162 IPR000210 GO:0005515
Mibi02g1804 656 Coils Coil 568 602 - -
Mibi02g1804 656 ProSiteProfiles NPH3 domain profile. 234 528 IPR027356 -
Mibi02g1804 656 PANTHER OS12G0117600 PROTEIN 57 616 IPR043454 -
Mibi02g1804 656 MobiDBLite consensus disorder prediction 633 656 - -
Mibi02g1804 656 SUPERFAMILY POZ domain 48 146 IPR011333 -
Mibi02g1804 656 Pfam NPH3 family 234 504 IPR027356 -
Mibi02g1804 656 FunFam BTB/POZ domain-containing protein At1g03010 39 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1804 Mibi-ChrMibi02 18722543 18726474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1804 24 478 EF-hand Containing Proteins AT2G47860 60.663 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1804 02 18722543 18726474 Mibi02g1804 02 18722543 18726474 ECH