Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1535 ATGACGGGATTTCCTCGGCTTAGTGATCAGACCCCACCGCCGTCTTCTTCTTCGTCTTCCTATAGTTCCAACAGCAGTGGAACAAATGTATTTAATTTGCTGGCACACAGAGAGATTTCTGTGAAATCAAAGTATGTACCAAAACAGCACTGGGGTTCTGAACCAAAAACTGGTTCTTGCACTCATCCTAAAATTGATACAGTGAGGGATTCGAAACGCAGTCTCCTCTCATGGGTTGAGGCAGAGTCATTGCGGCATTTATCAGCTAAATATTGTCCTTTGCTGCCTCCTCCGCGATCTACCATTGCAGCTGCATTTAGTCCAGATGGAAAAGTGCTTGCGTCGACACATGGTGACCACACTGTAAAAATAATTGATTGGGAAACTGGAAGTTGCTTAAACGTGTTGATTGGCCATAGAAGGACCCCTTGGGTGGTTAGGTTTCATCCGTTGCAAACACATATACTTGCTAGTGGGAGCTTGGACCAAGAAGTTCGCTTATGGGATGCTAACACATCAAAATGCATATTATTTCACCATTTCTGTAATTTTACTCTCAAACTCCAAGTCCTAAGTTACTTTTCCTCTGTTGCAGAATTTTTCTATTGTTCTATTGCTTCTATTATTACTCTTATTATTATCTTTTCATTCATAGATCGCCCCATTGCATCCATTGCTTTTCATGCTGAAGGGGAAATACTTGCGATTGCATCAGGCCACAAGTTGTACATATGGCACTACAATAAGAGAGGTGAGGGATCCTCACCTACATTTGTGTTGAAGACGAGGCGTTCACTTCGGGCTGTTCACTTTCACCCTCATGCAGCACCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACAGGCTACATCTCCTGGTTATTTACAATATCCTCCGCCTGCTGTGTTTGTTGCAAATATTCATTTTAAGGAGCATGTTGCTCTTCCCAGCAGTGAACTACCTTATTTGTCGTTACCTTTTTTCTTGTTGCCTTCATTCAATGTTAATGATTCAAGAATGGAAACGCATGGTGCTAGTGTTGTTGCTGGTTCAGAGAACATGCAAGTTGAATCTTCGGCCTCAGCACAGTTTCAAGCAGTCACAAATGCTACTGAGCAATATAGTAATACAGTGTCTCCCATGCATTCGGGCTCGGAGATTCCTACTAGCTCTCAATCTGGTACAGAATTCGCTGTACATAGTACCTTCTCAAATGGAATGGGAACTGGTATCAGTAACCCTGCTGTGGATGGTATGGAGACTGATGAAACAGTGCCAGCTGAAGGAAGCCAACATGGAAACTCTACAAATATCAGTTCTCTGGGTAATATGCTGCATGGTTTATACAGACAAACAACAAATCATGAGGGTCTTTCTGACTTGGGCCAATTTCACCGTCTTTTCCCCTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCAAGGATGGTTAATGGGCCAAAGCCAAGTTGGTGTCCCCTTGGTGCTTCCTCATTTGAGTGGTAGTCGGGACAGCTTGGCTCAGATCGGTTCTTCCACTATGGCATCTACTCCAGCCCCTCATGATGATGAAGCAACAACTTTGTCTTCAGCTATTCCAGGAAGCATGAGTATACCAGGAGCTCTGGGGAGATCGGGTTCACGCAGTCAATTTCCACAATCTCAGGTTTCTGCATCTGAATCTGGCAATATGGCTTCTTCCGTTAATATCCCGCATGGCGGCGCTGACATTCAAACCATTATAAATCGGGTTCAGTCAGAACTTGCCACATCAGTGGCTGCCGCAGCTGCCACAGAGCTGCCTTGCACAGTGAGGCTAAGAGTATGGTCACATGACATAAAAAATCCTTGTGCCCCACTAAGTGCCGAAAGATGCCGCCTTACAATACCACATGCTGTCTTGTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGGTTTCTGGCTGCATGTGTTGCATGTATGCTTCCTCCTGTAGAAGCTGATTCAGGATTACAAACGCAAGTACAACATGAGTCAGGAGGTGTAACATCCCCAACACGACATCCAATCTCGGCACACCAAGTTATGTACGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAACGGTGCTTGCATCACGGGCAATTAGAGCAGCTCACTGTCTAACTTCAATCCAGTTCTCACCCACGTCTGAGCACATACTGCTTGCCTATGGTAGACGTCATGGATCTCTTCTTAAAAGCATTGTTATTGATGGAGAAACAACCCTACCTATATATACTGTGTTAGAGGTATACAGAGTGTCAGATATGAAACTCGTCATGGTGCTTCCTAGTGCAGAGGATGAGGTCAATGTAGCGTGCTTTCATCCTTTTCCTGGGAGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTTAGAGTCCTCCACTATGATGGAGCTCACGCGGTAAATGGCACTAAAGCAAGTTATTTACCCGACGACAACATTATTGTAGTCAACTAA 2523 0.4459 MTGFPRLSDQTPPPSSSSSSYSSNSSGTNVFNLLAHREISVKSKYVPKQHWGSEPKTGSCTHPKIDTVRDSKRSLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDWETGSCLNVLIGHRRTPWVVRFHPLQTHILASGSLDQEVRLWDANTSKCILFHHFCNFTLKLQVLSYFSSVAEFFYCSIASIITLIIIFSFIDRPIASIAFHAEGEILAIASGHKLYIWHYNKRGEGSSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTQATSPGYLQYPPPAVFVANIHFKEHVALPSSELPYLSLPFFLLPSFNVNDSRMETHGASVVAGSENMQVESSASAQFQAVTNATEQYSNTVSPMHSGSEIPTSSQSGTEFAVHSTFSNGMGTGISNPAVDGMETDETVPAEGSQHGNSTNISSLGNMLHGLYRQTTNHEGLSDLGQFHRLFPSRDPSGWELPFLQGWLMGQSQVGVPLVLPHLSGSRDSLAQIGSSTMASTPAPHDDEATTLSSAIPGSMSIPGALGRSGSRSQFPQSQVSASESGNMASSVNIPHGGADIQTIINRVQSELATSVAAAAATELPCTVRLRVWSHDIKNPCAPLSAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPPVEADSGLQTQVQHESGGVTSPTRHPISAHQVMYELRIYSLEEATFGTVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFPGRGLVYGTKEGKLRVLHYDGAHAVNGTKASYLPDDNIIVVN 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1535 840 MobiDBLite consensus disorder prediction 520 574 - -
Mibi02g1535 840 ProSitePatterns Trp-Asp (WD) repeats signature. 156 170 IPR019775 -
Mibi02g1535 840 Gene3D - 100 303 IPR015943 GO:0005515
Mibi02g1535 840 SUPERFAMILY WD40 repeat-like 649 839 IPR036322 GO:0005515
Mibi02g1535 840 SMART WD40_4 129 169 IPR001680 GO:0005515
Mibi02g1535 840 SMART WD40_4 88 126 IPR001680 GO:0005515
Mibi02g1535 840 SMART WD40_4 776 816 IPR001680 GO:0005515
Mibi02g1535 840 SMART WD40_4 208 246 IPR001680 GO:0005515
Mibi02g1535 840 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 136 174 - -
Mibi02g1535 840 MobiDBLite consensus disorder prediction 1 25 - -
Mibi02g1535 840 Pfam WD domain, G-beta repeat 130 169 IPR001680 GO:0005515
Mibi02g1535 840 Pfam WD domain, G-beta repeat 103 126 IPR001680 GO:0005515
Mibi02g1535 840 MobiDBLite consensus disorder prediction 520 543 - -
Mibi02g1535 840 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 178 IPR001680 GO:0005515
Mibi02g1535 840 SUPERFAMILY WD40 repeat-like 102 282 IPR036322 GO:0005515
Mibi02g1535 840 MobiDBLite consensus disorder prediction 551 574 - -
Mibi02g1535 840 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 219 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1535 Mibi-ChrMibi02 15280344 15285914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1535 103 279 Miscellaneous Gene Families AT5G08390 24.868 4.68e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1535 02 15280344 15285914 Mibi02g1535 02 15280344 15285914 ECH