Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1413 ATGATCAACGCGCCCAACGGCATGTTATCTCCGTCGTCTTCATCTGCTACCGCCCAATCCCCTGGTCTCAAGTCTTATTTTAAGACTCCTGAAGGTCGCTACAAGCTTCTCTACGAGAAGACTCATCCTTCCGCCCTCCTTCACTATGCCCACGGCAAAACCGTCACTCAGGTAACTCTTGCACATCTCAAGGAGAAGCCTGCTCCTTCAACACCAACTGCCCCACCATCAAGTTTTACTGCCAGCAGTGGGGTGCGGTCAGCGGCTGCTAGATTGTTGGGAGGTGGCAATGGAAGCCGAGCGCTTAGTTTTGTTGGAGGGAATGGTAGCACCAAGAATGTTGGAGTGAACAGCAGGATTGGTTCACTTGGTGCCTCAAGTTCGAGTAGTTTAATGGCTAACTCAAATTTTGATGGCAAAGGAACGTACTTGATCTTCAATGTTGGTGATGCGATTTTTGTTAGTGTATTAAATTCTCAAGACAAGGATCCCATAAAGTCCATCCACTTCAGTAATTCCAATCCTGTGTGCCATGCCTTTGATGAGGAAGCCAAAGATGGGCACGATTTGCTTATTGGTCTTAGTACGGGTGATGTCTACTCAGTGTCACTGAGACAGCAATTGCAGGATGTCGGTAAAAAGCTTATAGGAGCTCATCATTACAACAAAGATGGTTCTGTTAATAACAGTCGTTGTACTAGTATTGCTTGGATTCCTGGAGGTGATGGTGCTTTTGTTGTTGCTCATGCCGATGGGAATTTGTATGTATATGAAAAGAACAAAGATGGTGCTGGAGAGTCTTCATTCCCAGTTATTAAAGATCAAGCACAGTTTTCTGTTTCTCATGCACGTTACAGTAAGAGTAATCCAGTAGCCAGATGGCATATATGCCAGGGTTCAATTAATAGTATTTCTTTCTCAAATGATGGTGCATACTTGGCAACTGTTGGAAGAGATGGCTATTTGCGAGTGTTTGATTTCACTAAGGAGCAGCTTATATGTGGTGGTAAAAGCTATTATGGTGCTCTGTTATGTTGTGCTTGGAGCATGGATGCAAAATATATTTTGACTGGAGGAGAAGACGATCTTGTGCAAGTTTGGAGCATGGAAGACCGCAAGGTTGTGGCATGGGGTGAGGGCCACAACTCATGGGTCAGCGGAGTGGCTTTTGATTCATATTGGACATCACCTACTTCAAATGATAATACTGAAACTGTTATGTATCGATTTGGATCTGTTGGTCAGGATACACAGTTGCTTCTTTGGGACCTGGAAATGGATGAGATTGTTGTACCACTGCGGCGTGCTCCTGGTGGATCCCCAACTTACAGTGTTGGGAGTCAGTCATCTCACTGGGATAGTGTTGTCCCATTGGGTACACTGCAACCTGCTCCAAGCATGGGTGATGTTCCGAAAATCTCGCCTCTTGTTGCTCATCGTGCACACACGGAACCCCTTTCAGGCTTGATATTTACCCAAGAATCTGTACTCACTGCTTGTCGAGAAGGACACATTAAAATCTGGACGAGACCTGGGATAACTGAGAACCAACCAACCAGCTCTGAAACCTTGTTATTTGCCAGCTTGAGGGAGAAACCACTACTTCCAAGCAAGGTTAGCAATACTAGTCACAAACAATGA 1641 0.4522 MINAPNGMLSPSSSSATAQSPGLKSYFKTPEGRYKLLYEKTHPSALLHYAHGKTVTQVTLAHLKEKPAPSTPTAPPSSFTASSGVRSAAARLLGGGNGSRALSFVGGNGSTKNVGVNSRIGSLGASSSSSLMANSNFDGKGTYLIFNVGDAIFVSVLNSQDKDPIKSIHFSNSNPVCHAFDEEAKDGHDLLIGLSTGDVYSVSLRQQLQDVGKKLIGAHHYNKDGSVNNSRCTSIAWIPGGDGAFVVAHADGNLYVYEKNKDGAGESSFPVIKDQAQFSVSHARYSKSNPVARWHICQGSINSISFSNDGAYLATVGRDGYLRVFDFTKEQLICGGKSYYGALLCCAWSMDAKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWTSPTSNDNTETVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRAPGGSPTYSVGSQSSHWDSVVPLGTLQPAPSMGDVPKISPLVAHRAHTEPLSGLIFTQESVLTACREGHIKIWTRPGITENQPTSSETLLFASLREKPLLPSKVSNTSHKQ 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1413 546 MobiDBLite consensus disorder prediction 1 24 - -
Mibi02g1413 546 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 377 IPR001680 GO:0005515
Mibi02g1413 546 PANTHER WD REPEAT PROTEIN 13 521 - -
Mibi02g1413 546 Gene3D - 12 516 IPR015943 GO:0005515
Mibi02g1413 546 SMART WD40_4 472 509 IPR001680 GO:0005515
Mibi02g1413 546 SMART WD40_4 329 368 IPR001680 GO:0005515
Mibi02g1413 546 SMART WD40_4 287 326 IPR001680 GO:0005515
Mibi02g1413 546 SMART WD40_4 371 423 IPR001680 GO:0005515
Mibi02g1413 546 SMART WD40_4 212 258 IPR001680 GO:0005515
Mibi02g1413 546 Pfam WD domain, G-beta repeat 343 368 IPR001680 GO:0005515
Mibi02g1413 546 Pfam WD domain, G-beta repeat 298 326 IPR001680 GO:0005515
Mibi02g1413 546 SUPERFAMILY WD40 repeat-like 164 509 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1413 Mibi-ChrMibi02 14083308 14088278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1413 303 430 Miscellaneous Gene Families AT5G08390 21.875 2.79e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1413 02 14083308 14088278 Mibi02g1413 02 14083308 14088278 ECH