Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1216 ATGACCATGCAGGTTGGCCACGTGGATATAAAACCCGGGGTCCACACCTACGCTGCTCAGTGGCCAATCTATGCTCTGGCATGGTCATCACGTCGCGACAAAAATCCTCGACTCGCTATAGGTAGTTACATAGAAGACCACATGAACAAAGTCGAACTCGTTCACTTCAACCACGACACACTGAGTTACACCACCGACCCCAATCTGATATTTGACCATCCTTACTCTCCAACCAACATCATGTTCTTCCCTTCCGAGGACGACACAAACCCCGACATCATCGCCACCTCCGGCGACTACCTTAGACTATGGGAAATCCAAAGTGATCGGATTGAGCTCAAGTCCCTACTTTCCGGCAACAAAGTCCGAGACATCTCAGCCCTGACATCTTTCGACTGGGCCGAGTTTGACACGCGTCGTGTGGCTGCTTCTAGCGTGGACACCACGTGCACCATATGGGATATTGAGAGGGAAGTTTTGGACACACAATTAGTGGCACATGACAAGGAAGTGTACGACATATCATGGGGTGGTTTTAACGTGTTTGCTTCAGTGTCTGGGGATGGTTCTGTGAGGGTTTTTGACTTGAGGGACAAGGAAAGGTCGACTATAATATTTGAGAATCCGGTACAAGATTGTCCTTTGTTACGCCTGGAATGGAATAAAGGGGATCCAAGGTTTATAGCAACGGTTGGGATGGATAGTAGTAAAGTGGTAATAATGGACATTAGGCAACCAACTACGCCTGTGATGGAATTGAATAAGCATAAGGCAAGTGTGAATGCTATATCGTGGTCCCCACATAGGGGACGTCAGCTTTGTTCTTGTGGGGATGATTCGAGGGCTTTGATTTGGGACGTGGTGGGTACTACTGGGTTTCAACCCAGGAATAATAATAGTGGTGGTGATGATGTGAAGCCTGATATGTGTTATGAATCAACTGCTGAGATCAATCAGGTGAGATGGTCCACTGTTCAGACGGACTGGATTGCACTTGCTTTCGTGAATATATTACAGCTTTTGAAGGTGTAG 1032 0.4729 MTMQVGHVDIKPGVHTYAAQWPIYALAWSSRRDKNPRLAIGSYIEDHMNKVELVHFNHDTLSYTTDPNLIFDHPYSPTNIMFFPSEDDTNPDIIATSGDYLRLWEIQSDRIELKSLLSGNKVRDISALTSFDWAEFDTRRVAASSVDTTCTIWDIEREVLDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKERSTIIFENPVQDCPLLRLEWNKGDPRFIATVGMDSSKVVIMDIRQPTTPVMELNKHKASVNAISWSPHRGRQLCSCGDDSRALIWDVVGTTGFQPRNNNSGGDDVKPDMCYESTAEINQVRWSTVQTDWIALAFVNILQLLKV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1216 343 ProSitePatterns Trp-Asp (WD) repeats signature. 273 287 IPR019775 -
Mibi02g1216 343 SMART WD40_4 246 286 IPR001680 GO:0005515
Mibi02g1216 343 SMART WD40_4 201 242 IPR001680 GO:0005515
Mibi02g1216 343 SMART WD40_4 157 195 IPR001680 GO:0005515
Mibi02g1216 343 SMART WD40_4 118 154 IPR001680 GO:0005515
Mibi02g1216 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 164 204 IPR001680 GO:0005515
Mibi02g1216 343 PANTHER WD REPEAT CONTAINING PROTEIN 12 343 IPR045159 -
Mibi02g1216 343 Gene3D - 12 339 IPR015943 GO:0005515
Mibi02g1216 343 SUPERFAMILY WD40 repeat-like 22 290 IPR036322 GO:0005515
Mibi02g1216 343 Pfam WD domain, G-beta repeat 164 195 IPR001680 GO:0005515
Mibi02g1216 343 Pfam WD domain, G-beta repeat 249 286 IPR001680 GO:0005515
Mibi02g1216 343 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 287 - -
Mibi02g1216 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 287 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1216 Mibi-ChrMibi02 12012268 12013299 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1216 02 12012268 12013299 Mibi02g1216 02 12012268 12013299 ECH