Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1205 ATGGCCGCCGCTTCTCCACTCTCTGAACTCACCAGAAGGCTGGCAGGGAAAGTAGCCATTATAACAGGAGGAGCCAGCGGGATCGGGAAGCGCACCGCCCAATTGTTCGCCGGCCACGGAGCCAAGGTAGTAATCGCCGACATTCAAGATGAATTGGGCCAGTCCGTGGCCCAATCCATAGGCCCATCCGACTGCCTATACGTCCGCTGCGACGTCACCGACGAGGCCCAAGTCAAAAACGCCGTCTCCACGGCGGTCAAAACCTTCGGTAAACTAGACATCATGTTCAACAACGCCGGCATATTAGATCCAAACAAGGACAGAATAATAGACAACGAGACGGCAGACTTCGAGCGCGTGATGCGCGTGAACGTCACCGGCGTCTTCCTCGGAATCAAGCACGCGTCTCAGGCCATGATTCCGGCGCGTGGCGGAAGCATAATATCGACGGCGAGTATAAGCTCGTACTTGGGAGGGGCTGCATCCCACGCGTACACGTGTTCAAAGCATGCGGTGGTGGGGTTAACGAAGAATGCGGCGGTGGAGTTAGGTCAGTTTGGGATTAGGGTTAACTGTTTATCGCCGTTTGCCATGGCAACGCCGTTAGCTACCAAGTTTGTTGGGCTTGATGATGAGGAGCTACAGGATAGGATGGGCTCGCTTGCTAATTTGAAGGGGGTGACACTTAAGGTTGATGACGTGGCCAATGCCGCGCTTTATATGGCGAGTGATGAGTCTAGGTATGTGAGTGGCCATAATTTGCTCATTGATGGTGGTATTAGTATTGTTAATCCTTCCTTTGGATTGTTTCAGTACCCTCCTGACTCTTGA 831 0.5319 MAAASPLSELTRRLAGKVAIITGGASGIGKRTAQLFAGHGAKVVIADIQDELGQSVAQSIGPSDCLYVRCDVTDEAQVKNAVSTAVKTFGKLDIMFNNAGILDPNKDRIIDNETADFERVMRVNVTGVFLGIKHASQAMIPARGGSIISTASISSYLGGAASHAYTCSKHAVVGLTKNAAVELGQFGIRVNCLSPFAMATPLATKFVGLDDEELQDRMGSLANLKGVTLKVDDVANAALYMASDESRYVSGHNLLIDGGISIVNPSFGLFQYPPDS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1205 276 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 152 180 IPR020904 GO:0016491
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 139 155 IPR002347 -
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Mibi02g1205 276 PRINTS Glucose/ribitol dehydrogenase family signature 186 203 IPR002347 -
Mibi02g1205 276 FunFam Short-chain dehydrogenase reductase 2 264 - -
Mibi02g1205 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 263 IPR036291 -
Mibi02g1205 276 Pfam Enoyl-(Acyl carrier protein) reductase 23 261 - -
Mibi02g1205 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Mibi02g1205 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Mibi02g1205 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 IPR002347 -
Mibi02g1205 276 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 11 264 - -
Mibi02g1205 276 Gene3D - 4 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1205 Mibi-ChrMibi02 11914022 11914973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1205 14 270 Acyl Lipid Metabolism Gene Families AT1G63380 31.734 1.37e-28 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1205 02 11914022 11914973 Mibi02g1205 02 11914022 11914973 ECH