Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1193 ATGGCTTCTCCACCCATCCTTCTTCTACTCTCCCTCTTTTCTCTCATCTCCTTCGCTTCCTCGCTCTCACCCATTTCTCTTCCCATCTCTCCCTTACACTCCAAACACCCTTCTTCCTCCGATCCCTTTCACAACCTCAAACTCGCCGCCTCTTCTTCCCTCTCCAGAGCCCACCACCTGAAACACCGTAAATCCAAATCCAAATCCAATTCTTCCAACATCAAAACCCCAGATTCCCCCAAAAGCTACGGTGGTTACTCCGTCGATCTCAGCTTCGGGACGCCCCCTCAAACCTTCCCTTTCGTCTTGGACACCGGAAGCAGCCTCGTCTGGTTCCCTTGCTCCTCCCATTACCTCTGTTCCAGATGTTCCTTCCCCAACATCGATTCCTCCTCACTCCCCAAGTTCATCCCCAAGAATTCCTCCACCGCCAAGTTCGTCGGTTGCAGAAATCCCAAATGTAGCTGGATTTTCGGCCCCGATCTTCAGTCTCGATGCCAACAATGCCAACCCACTTCCCAAAATTGCTCCCAGATTTGCCCCACTTATATAATTCAGTATGGTTCTGGCACAACCGCTGGATTTTTACTCTCAGATAACCTCGACCTTAACGGAAAAATCGTGCCCGATTTTCTTGTTGGGTGCTCCATCATGTCGATCCGACAACCCGCCGGGATCGCCGGGTTTGGTAGGGGATCTGAATCGCTTCCTTCGCAGTTGGGTCTCAAGAAATTCTCTTACTGTTTACTCTCTCATCGGTTTGATGATGACACTTCCGAAAGCAGTGACCTCATTTTGCAGAGTGAGTCCTCTGGCGATACGAAAACCGAAGGCCTTAGCTACACTCCGTTTCAGAAAAACCCAGCTGCGAACAACTCAGCATTCCAGGAATATTATTACTTGACCATTCGGAAAATCATCATCGGTGGGGAGCTAGTGAAGATTCCATCCAAGCTTTTCGAGCCAGATTTAGATGGTAATGGGGGTGTCACAGTGGACTCAGGAAGCACCTTCACATTCATGGAGAAGCCCATTTACGATATGGTGGCGCAGGAATTCGAGAGACAGATGGCTAATTATACAAGAGCTAAGGAAGTGGAAACCCAATCTGGTTTGAGCCCCTGTTTCGATTTTACAGGGCTGAAATCGATTTCTTTCCCGGAATTCACCATCAAATTCAGAGGGGGTGCCAACATGACATTGCCCCTGGAGAACTATTTCTCGTTGGTGGACGCATCGCAGGTCGCATGTTTGACTATTGTCTCAGACAATGGATCCACGGCGGCGCTGTCCAGAGGGCCGGCGGTGATTCTCGGAAACTATCAGCAGCAGAATTTCTACGTGGAATATGACTTGGAAAATGAGAGGTTTGGATTTGGGGCTCGAAGTTGCAAGAAGGAGACTTAG 1407 0.494 MASPPILLLLSLFSLISFASSLSPISLPISPLHSKHPSSSDPFHNLKLAASSSLSRAHHLKHRKSKSKSNSSNIKTPDSPKSYGGYSVDLSFGTPPQTFPFVLDTGSSLVWFPCSSHYLCSRCSFPNIDSSSLPKFIPKNSSTAKFVGCRNPKCSWIFGPDLQSRCQQCQPTSQNCSQICPTYIIQYGSGTTAGFLLSDNLDLNGKIVPDFLVGCSIMSIRQPAGIAGFGRGSESLPSQLGLKKFSYCLLSHRFDDDTSESSDLILQSESSGDTKTEGLSYTPFQKNPAANNSAFQEYYYLTIRKIIIGGELVKIPSKLFEPDLDGNGGVTVDSGSTFTFMEKPIYDMVAQEFERQMANYTRAKEVETQSGLSPCFDFTGLKSISFPEFTIKFRGGANMTLPLENYFSLVDASQVACLTIVSDNGSTAALSRGPAVILGNYQQQNFYVEYDLENERFGFGARSCKKET 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1193 468 SUPERFAMILY Acid proteases 82 464 IPR021109 -
Mibi02g1193 468 PANTHER OS07G0603500 PROTEIN-RELATED 30 465 - -
Mibi02g1193 468 FunFam Aspartyl protease family protein 270 467 - -
Mibi02g1193 468 ProSiteProfiles Peptidase family A1 domain profile. 86 460 IPR033121 -
Mibi02g1193 468 Pfam Xylanase inhibitor C-terminal 299 460 IPR032799 -
Mibi02g1193 468 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Mibi02g1193 468 MobiDBLite consensus disorder prediction 54 80 - -
Mibi02g1193 468 Gene3D Acid Proteases 65 265 IPR021109 -
Mibi02g1193 468 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Mibi02g1193 468 PRINTS Pepsin (A1) aspartic protease family signature 330 341 IPR001461 GO:0004190|GO:0006508
Mibi02g1193 468 PRINTS Pepsin (A1) aspartic protease family signature 436 451 IPR001461 GO:0004190|GO:0006508
Mibi02g1193 468 CDD pepsin_A_like_plant 85 464 IPR034161 -
Mibi02g1193 468 Gene3D Acid Proteases 267 468 IPR021109 -
Mibi02g1193 468 Pfam Xylanase inhibitor N-terminal 86 264 IPR032861 -
Mibi02g1193 468 FunFam Aspartic proteinase nepenthesin-2 57 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1193 Mibi-ChrMibi02 11807527 11808933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1193 64 466 Miscellaneous Gene Families AT1G44130 25.408 4.87e-15 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1193 02 11807527 11808933 Mibi02g1193 02 11807527 11808933 ECH