Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1139 ATGAAGAAGACTCTGCTTGTTTTAGTGTTGGAATCTGCGGGCTGCGCAAAACTACAAATGGATAATCAACAAACAAGTCATTTACCCAATGAGAAATTCACATGGAGAATTGAAAACTTCTTTAAGTTGAAGTCTAAGAAGGTTTACTCCGACACTTTCATTATGGGCGGTTATCCATGGAGGATTCTTTTATTTCCTAAAGGGAACAATGTGGAATACTTGTCTTTATATTTGGATGTTGTGGATTCCAAGAGTTTACCTGCTGGTTGGTCCAGATGTGCATGTTTCAGCTTGGCTGTAATTAATCAAGTATCCGTAAAGTACACTGTCGAGAAAGACACTCAACATTGGTTTAATGCAAGAGAGAGTGACTGGGGTTTCACATCATTTATGCCTCTAAGTGATCTTTATAACCCTGAGAAGGGTTATATTGTTGGAGATACGATTATAATTAATGCTGAGGTTTCTATTCCCGAATCTGAAAAGGAGAATCAAGTAGATCAATCATCAGACCCAACGTCTCTGGAATCTGGAAATCAAGCTGGACAAATGGAAGTGGAACAGCAAGATCGGGAGCAAAAAGCATGCGATTCCATGGGGCCTGCTGAGCAGACGGGTAATCCTTCATTTCCAGCAGGACTGACCTCAAACCCAATGGATGGGCTTTCGGATTTTCGAGGTCTTTGGAGAATAGAAAATGTTTTTATCCCACTGCTGGAGGAAGTATGTTCCAAGCACCCATCACTCCTTGAATGTCAGAAGAAGAGAAGTGGACGATTTGTTGAATGGGCATTCACAGCTTTAGGCAGAGTTTTACATTTCCTAAAGACTAAAAGGGTGAAAGACATGAATGATGAGGCTTGTGAGCATCTTCAAATTCTATGGGAGGAACTTGAGACATTTAGATTTGATTTGACTTGGCTCGAGCCTCACGTTCAATCAGCCTTGAGCATGAAAAACTACATGGAGAAGGCAATGCAGGTGAAGAAGTTGAAGGATAATGTGAGTGGTCTGGAGATGGAAATGAAGAGGCTTAAAGCAAAACTTGTAGCTGCAGAGTTAGATCTTGATATAGCAAAACGAGACTTGGTGCAAGCACAGGAAGGGTTCGAAGAGAGGGATTTGGATGCTGAACTCGGATATGGGAGACCATAG 1155 0.4156 MKKTLLVLVLESAGCAKLQMDNQQTSHLPNEKFTWRIENFFKLKSKKVYSDTFIMGGYPWRILLFPKGNNVEYLSLYLDVVDSKSLPAGWSRCACFSLAVINQVSVKYTVEKDTQHWFNARESDWGFTSFMPLSDLYNPEKGYIVGDTIIINAEVSIPESEKENQVDQSSDPTSLESGNQAGQMEVEQQDREQKACDSMGPAEQTGNPSFPAGLTSNPMDGLSDFRGLWRIENVFIPLLEEVCSKHPSLLECQKKRSGRFVEWAFTALGRVLHFLKTKRVKDMNDEACEHLQILWEELETFRFDLTWLEPHVQSALSMKNYMEKAMQVKKLKDNVSGLEMEMKRLKAKLVAAELDLDIAKRDLVQAQEGFEERDLDAELGYGRP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1139 384 MobiDBLite consensus disorder prediction 167 186 - -
Mibi02g1139 384 ProSiteProfiles MATH/TRAF domain profile. 30 155 IPR002083 GO:0005515
Mibi02g1139 384 SUPERFAMILY TRAF domain-like 29 159 - -
Mibi02g1139 384 MobiDBLite consensus disorder prediction 200 216 - -
Mibi02g1139 384 CDD MATH 32 155 IPR002083 GO:0005515
Mibi02g1139 384 FunFam Ubiquitin carboxyl-terminal hydrolase 13 28 163 - -
Mibi02g1139 384 SMART math_3 32 136 IPR002083 GO:0005515
Mibi02g1139 384 Pfam MATH domain 37 157 IPR002083 GO:0005515
Mibi02g1139 384 MobiDBLite consensus disorder prediction 160 216 - -
Mibi02g1139 384 Coils Coil 328 362 - -
Mibi02g1139 384 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 24 356 - -
Mibi02g1139 384 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 27 174 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1139 Mibi-ChrMibi02 11266135 11269008 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1139 02 11266135 11269008 Mibi02g1139 02 11266135 11269008 ECH