Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1041 ATGAGCCACTCGCTCTTCACACTCAATCCCTTAACTGTCTCCACCTCTCACCGGCCCGGCGGAATCCACCGCAGCAGGCCTCCTATTTCTCGCCGGAGCATTTCCCTTTGCTCGGCGAAGCCATTGGTTTCCGCTCCTTCCAATCCCACCTCCGCCACTGTTGATGGGCTGAGTCGAATCGGGTCACTGAGTCAGGTTTCCGGTGTTTTGGGTTGCCAGTGGGGCGATGAAGGTAAAGGTAAGCTCGTCGATATCTTAGCCCACCACTTCGATATCGTTGCTCGTTGTCAGGGTGGAGCAAATGCCGGGCATACCATTTATAACTCTGAAGGAAAAAAATTTGGTCTTCACCTTGTTCCTTCTGGTATACTTAATGAGGATATATTGTGTGTTATCGGGAATGGGGTTGTGGTGCATCTGCCAGAGTTTTTTAGAGAAATTGATGGCTTAGAATCCAATGGGGTATCCTGCAAAGGAAGGATACTGATATCTGATCGTGCTCACTTGTTGTTTGATTTTCACCAAGTAGTTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAGAGAGGCATTGGACCCTGTTATTCTAGCAAGGTTATCCGTAATGGCATCAGAGTAAGTGATTTGAAGTATATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCAGATGCGGCGTTAAGATTCAAAGATTTTAACTATGGTCCGGACATTCTCAGGGAAGAAGTTGAAAGGTACAAGAGATATGCCGAGAGATTGGAACCTTTCATTGCTGATACTGTACATTTCATGAATGAAGCTATAACACAAAAGAAGAAGATTCTTGTTGAAGGGGGTCAAGCAACAATGTTGGACATTGATTTTGGAACTTATCCCTTTGTAACTTCATCCAGTCCCTCAGCAGGTGGGATTTGTACTGGTCTAGGTATTGCTCCAAGAGTCATTGGTGATCTAATCGGTGTGGTTAAAGCGTACACTACAAGGGTTGGTTCCGGCCCTTTTCCCACTGAAATCTTGGGTCAGGAGGGTGATCTCCTTAGATTTGCCGGGCAGGAGTTTGGCACAACTACTGGTCGTCCCAGACGTTGTGGTTGGCTTGATGTAGTTGCATTAAGATATTGCTATCAGATCAATGGGTTTTCATCTCTCAATCTCACCAAGCTGGATGTTTTGTCAGATTTTACTGAAATTAAATTGGGGGTGTCTTATAAACTTGTTGATGGTACACTGATCAAGTCATTCCCTTCAGACCTCCGTCTTCTAGACCAGTTGAAGGTGGAGTATGAGGTACTTCCAGGGTGGAATTGTGATATTTCTTCCATCAGAAACTATTCTGAACTTCCAAGAGCTGCACGCCATTATGTGGAAAGAATAGAAGAACTTCTTGGCGTGCCAATTCACTACATTGGTGTTGGACCTGGGCGTGATGCTCTCATTTATAAATAA 1467 0.4458 MSHSLFTLNPLTVSTSHRPGGIHRSRPPISRRSISLCSAKPLVSAPSNPTSATVDGLSRIGSLSQVSGVLGCQWGDEGKGKLVDILAHHFDIVARCQGGANAGHTIYNSEGKKFGLHLVPSGILNEDILCVIGNGVVVHLPEFFREIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVSDLKYMDTFPQKLDLLLSDAALRFKDFNYGPDILREEVERYKRYAERLEPFIADTVHFMNEAITQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTEILGQEGDLLRFAGQEFGTTTGRPRRCGWLDVVALRYCYQINGFSSLNLTKLDVLSDFTEIKLGVSYKLVDGTLIKSFPSDLRLLDQLKVEYEVLPGWNCDISSIRNYSELPRAARHYVERIEELLGVPIHYIGVGPGRDALIYK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1041 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 487 IPR027417 -
Mibi02g1041 488 MobiDBLite consensus disorder prediction 1 28 - -
Mibi02g1041 488 SMART adenylsucc_synt 66 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
Mibi02g1041 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 69 328 IPR042109 -
Mibi02g1041 488 ProSitePatterns Adenylosuccinate synthetase active site. 196 207 IPR033128 -
Mibi02g1041 488 FunFam Adenylosuccinate synthetase 329 488 - -
Mibi02g1041 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 165 263 IPR042110 -
Mibi02g1041 488 CDD AdSS 65 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
Mibi02g1041 488 TIGRFAM purA: adenylosuccinate synthase 69 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Mibi02g1041 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 329 488 IPR042111 -
Mibi02g1041 488 MobiDBLite consensus disorder prediction 1 19 - -
Mibi02g1041 488 FunFam Adenylosuccinate synthetase, chloroplastic 165 263 - -
Mibi02g1041 488 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 73 80 IPR018220 GO:0005525
Mibi02g1041 488 Hamap Adenylosuccinate synthetase [purA]. 1 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Mibi02g1041 488 Pfam Adenylosuccinate synthetase 69 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Mibi02g1041 488 PANTHER ADENYLOSUCCINATE SYNTHETASE 54 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1041 Mibi-ChrMibi02 10252770 10255546 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1041 02 10252770 10255546 Mibi02g1041 02 10252770 10255546 ECH