Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1025 ATGCACTTCTCTTCGGCGAATACTGTACTTAGGTGTTCAAAGATGACTGTCACGCCAAAGATCTCGGTCAACGATGGGAACCTGGTTGTCCATGGGAAGACCATACTGACTGGAGTACCAGATAACATTATGCTGACCCCAGGATCTGGAGTGGGCCTTGTAGCTGGTGCATTTCTTGGTGCCACAGCTTCCCACAGCAAAAGTCTCCATGTCTTCCCCATTGGTATCTTAGAGGGACTTCGTTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGGATGGGAACTTGTGGAAGGGATATCCCTTTGGAAACCCAATTCATGCTGATAGAGAGCAAAAATGATGAAGCTGCTGATCAGGAGAATTCTCAAACCATCTACACCGTCTTGCTTCCTCTCCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGAGAAAAATGAGATAGAGATTTGCCTTGAGAGTGGTGACAATGCCGTTGAGACGAGTCAAGGTCTTCACCTGGTCTACATACAAGCTGGAACAAACCCCTTTGAAGTCATTAACCAAGCAGTCAAGGCTCTAGAAAAACACATGAAAACATTCCTTCATCGTGAGAAGAAAAAGTTGCCATCTTTTCTCGACTGGTTCGGCTGGTGCACATGGGATGCTTTCTATACTGATGTTACAGCAGAGGGTGTTGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACTCCACCACGCTTCCTTATCATAGATGATGGCTGGCAACAAATTGAAAACAAAGCAAAGGACACAGACTGTGTTGTTCAAGAAGGAGCACAGTTTGCCACTAGGTTGACTGGTATAAAAGAAAACGCTAAATTTCAAAAGAATGGACAGAATAACGAACAGAACTCAGGCCTGAAGCATGTAGTAGATGAAGCGAAGCAACATCACAATGTGAAATATGTATATGTATGGCATGCTCTTGCCGGTTATTGGGGTGGAGTGAAGCCAGCAGCCAGTGGCATGGAACATTATGACACGGCCTTAGCATACCCGGTTCAGTCTCCTGGCGTACTAGGAAACCAACCAGACATTGTTATGGACAGCTTGGCTGTACATGGCTTGGGTCTAGTGCATCCCAAGAAGGTTTATAACTTCTACAATGAGCTCCATGCTTACTTAGCATCATGTGGAGTAGATGGAGTAAAAGTTGATGTTCAGAACATTATTGAAACTCTTGGGGCTGGACATGGTGGCAGAGTATCCCTCACACGCAGCTATCATCAGGCCCTCGAGGCCTCTGTGGCTCGTAACTTCCCTGATAATGGATGTATCGCTTGTATGTGTCACAATACCGACGGGATATATAGCGCGAAGCAGACTGCTGTTGTGAGAGCGTCTGATGACTTTTACCCACGCGATCCTGCTTCCCACACTATCCATATATCATCTGTAGCATACAACTCACTATTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCGGCTCGAGCAGTTGGTGGGTGTGCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGAACTGCTCAGGAAGCTGGTTCTGCCAGATGGATCAGTTCTTCGTGCTCAACTACCAGGCAGGCCCACTCGCGATTCTCTCTTTGCTGATCCAGCTAGAGATGGGACTAGCTTGCTCAAAATATGGAACTTGAATAAATGCTCTGGAGTGGTTGGGATATTTAACTGTCAAGGCGCTGGGTGGTGCAAGGTAGAGAAGAAGACCCGGATCCATGATGCAGCTCCTGGTACTCTCACAGGGTCTGTTCGTGCTTCTGATGTTGATCTCATCACTCAGGTGGCTGGTGGCGATTGGGATGGCGACACTATTGTGTACTCCTACAAATCAGGTGAGGTGACTAGGCTACCTAAAGATGCTTCAGTGCCAGTGACATTGCAAGTTTTGGAGTATGAACTATTCCATTTCTGTCCAGTGAAGAAAATTGGTCCAAGTATTTCCTTTGCAGCAATAGGGCTACTGGACATGTTCAACACTGGAGGAGCTGTTGAGGAGGTTGAAATCCACAGAGCAAATGAGAAAGAACAAGTATTTGATGGTGAGGTTGAATCTGAGCTGACCACTTCTCTGAGTTCAAACCGATCAGCAACGGCAACCATTGTCCTCAGAGTGAGAGGGAGTGGCAGATTCGGAGCCTACTCGTCCCAATGCCCATTGAAGTGTGTTGTGGGTGATGCTGAGACTCATTTTGACTATGACTTAGCCACCGGGTTGGTCACATTCACTGTCCCACTCCCTTCTGAGGAAATGTACAAATGGGTCATAGAGATCCTAGTCTAA 2364 0.4687 MHFSSANTVLRCSKMTVTPKISVNDGNLVVHGKTILTGVPDNIMLTPGSGVGLVAGAFLGATASHSKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESKNDEAADQENSQTIYTVLLPLLEGPFRAVLQGNEKNEIEICLESGDNAVETSQGLHLVYIQAGTNPFEVINQAVKALEKHMKTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIENKAKDTDCVVQEGAQFATRLTGIKENAKFQKNGQNNEQNSGLKHVVDEAKQHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVYNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFELLRKLVLPDGSVLRAQLPGRPTRDSLFADPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKVEKKTRIHDAAPGTLTGSVRASDVDLITQVAGGDWDGDTIVYSYKSGEVTRLPKDASVPVTLQVLEYELFHFCPVKKIGPSISFAAIGLLDMFNTGGAVEEVEIHRANEKEQVFDGEVESELTTSLSSNRSATATIVLRVRGSGRFGAYSSQCPLKCVVGDAETHFDYDLATGLVTFTVPLPSEEMYKWVIEILV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1025 787 Pfam Raffinose synthase or seed imbibition protein Sip1 21 771 IPR008811 -
Mibi02g1025 787 PANTHER - 15 784 IPR008811 -
Mibi02g1025 787 Gene3D Aldolase class I 212 526 IPR013785 -
Mibi02g1025 787 SUPERFAMILY (Trans)glycosidases 210 536 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1025 Mibi-ChrMibi02 10090239 10096426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1025 15 571 Glycoside Hydrolase AT3G57520 84.022 0.0 1002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1025 02 10090239 10096426 Mibi02g1025 02 10090239 10096426 ECH