Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0971 ATGAAGCTCATCAATATCAGCCCTAAATCCCTCCGCCTCAACCCTAAACAACTCTTCCGTTCCAAGAATCAGCCACGCGCCTCCGTCTCCAGATCCCTTCCTTCCTCCTTCAGCTCTTCTTCTTCTTCTTCGTCTTCCTCCTCCTCCTCCGACGACTCCACTCACAAGCCTCCTCCCGGCCCTCCCGGCTCCACCACACCGACCAGCGTCTTGCCCGAATTGTACCCCGACTGGTCCGATCTCTCCACCGAAATCCACTCAGATTTCGCTCAGGCCTTGAGGATCATCGACCGAGACGACGACGGCTTTATCTCGCGACAAGACCTCGAGGCTTTTCTCACTCGGCTCGGTGAGAGCAAGGAGGATGTGGAGATGATGCTCACTGATGTGGATCCTGAAGGAAGGGGTTGTATTAGAGTTGAGACGCTCATGAATCGGGTCGGGTCGGGTTGTCCTGCGCCCGATTCTGGCGATCTGAAGGAGGCGTTTGAGGTGTTCGATTCGGATCGCGACGGGAAGATCTCGGCGGAGGAGCTGTTAGGGTTCTTCAAGGCGGTTGGGGATGAGCGGTGCACGTTAGAGGAATGCCGGCGCATGATAAGAGGGGTTGATCACAACGGGGATGGCTTTGTCTGCTTTGAGGAGTTCTCTCGTATGATGGAGTTGCAGCGATGA 675 0.5585 MKLINISPKSLRLNPKQLFRSKNQPRASVSRSLPSSFSSSSSSSSSSSSSDDSTHKPPPGPPGSTTPTSVLPELYPDWSDLSTEIHSDFAQALRIIDRDDDGFISRQDLEAFLTRLGESKEDVEMMLTDVDPEGRGCIRVETLMNRVGSGCPAPDSGDLKEAFEVFDSDRDGKISAEELLGFFKAVGDERCTLEECRRMIRGVDHNGDGFVCFEEFSRMMELQR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0971 224 ProSitePatterns EF-hand calcium-binding domain. 97 109 IPR018247 -
Mibi02g0971 224 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 158 221 - -
Mibi02g0971 224 SMART efh_1 88 116 IPR002048 GO:0005509
Mibi02g0971 224 SMART efh_1 195 223 IPR002048 GO:0005509
Mibi02g0971 224 SMART efh_1 158 186 IPR002048 GO:0005509
Mibi02g0971 224 CDD EFh 88 138 IPR002048 GO:0005509
Mibi02g0971 224 Pfam EF hand 92 112 IPR002048 GO:0005509
Mibi02g0971 224 MobiDBLite consensus disorder prediction 10 54 - -
Mibi02g0971 224 ProSiteProfiles EF-hand calcium-binding domain profile. 84 119 IPR002048 GO:0005509
Mibi02g0971 224 ProSiteProfiles EF-hand calcium-binding domain profile. 154 189 IPR002048 GO:0005509
Mibi02g0971 224 ProSiteProfiles EF-hand calcium-binding domain profile. 191 224 IPR002048 GO:0005509
Mibi02g0971 224 Gene3D - 151 224 - -
Mibi02g0971 224 SUPERFAMILY EF-hand 72 220 IPR011992 -
Mibi02g0971 224 CDD EFh 158 220 IPR002048 GO:0005509
Mibi02g0971 224 ProSitePatterns EF-hand calcium-binding domain. 204 216 IPR018247 -
Mibi02g0971 224 FunFam calmodulin-like protein 3 153 224 - -
Mibi02g0971 224 ProSitePatterns EF-hand calcium-binding domain. 167 179 IPR018247 -
Mibi02g0971 224 MobiDBLite consensus disorder prediction 1 75 - -
Mibi02g0971 224 Pfam EF-hand domain pair 158 220 IPR002048 GO:0005509
Mibi02g0971 224 Gene3D - 70 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0971 Mibi-ChrMibi02 9586265 9586939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0971 9 224 EF-hand Containing Proteins AT3G10190 51.364 1.85e-57 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0971 02 9586265 9586939 Mibi02g0971 02 9586265 9586939 ECH