Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0900 ATGGCCAAAGGCGTAGTCTCAGACGACGAAGACGAGGTTGAATTCGAAGAGGAGGAGAGGGAGCCAGTTGATGGAGAGGGTATGGATGAAGACGAGGAAGAGGACGAAGAAGAGGAAGGTCAGGATGAGTATGAGAATGATGGATTTATAGTAGATGACTTCGAGGAAGAGGAGGAACAAGATGAAGAAGAGAGGGCAGACAGCGATGAGGAACGGCAGAAGAAGAAAAAGCGGAAGAAAAAGGAGGAGTATATTCTGGATGAAGATGATTATGCACTTCTAGAGGACAATAATATCAATATTCACCGTAGGAAGGAGAGCAAAAAGTTTAAGCGGCTTAAAAAAGGCCAGAGGGACACTGAGGATGAGCCCTCTGGATTATCTGAAGAGGAGGAATTTGATGGTAGTGGTAAAGGTGGACGAACTGCAGAGGAGAAGCTTAAGCGCAGTTTATTTGGTGATGATGAAGGAGCTCCACTTGAAGACATTGCTGAAGAGGAGGAGCAGGGAGAAGAGGAGGACGATGCAGATATTGGTGAAGAAGATGAAATGGCGGACTTCATTGTGGATGAGGAAGAAGTTGATGAACATGGAGCTCCCATGAGGCGAAAGAAACTGAAGAAAAAGAAAGCTAGGCAGGCACCAGGAGTATCTTCTTCTGCACTGCAAGAAGCTCAGGAATTATTTGGTGATGTTGATGAGCTGCTTCAGTCTCGCAAGCAAAGTCTGGAACTACGTGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCTGTTGTCCTATCTGAGAAATATATGACAGAGAAGGATGATCGAATTAGGGAGCTTGATATTCCAGAAAGAATGCAGATATCAGAGGAGAGTACTGGTGCACCTCCACTGGATTCAGTTAGTGTAGAAGAGGAGAGCCGTTGGATAGAAGACCAACTTAAAAAGGGAACGGTACCTTGGATTCACAAGAAAGACGTTGGCAATTTACAGATTAAAGCTCATGACATCACCAGATTTTTGGAACTGCATCATGGACAGAAATTAGACATCCCTTTTATCGCTATGTATCGGAAGGAGGAGTGCTTAAGCCTTTTGAAAAATCTTGAGCAACCTGATGATGAGAATTGGGATAAAAATGAAAAGCCTCCAACTTTAAAATGGCACAAGGTGCTTTGGGCAATTCAAGACTTGGACCATAAGTGGTTGCTTCTTCAGAAGCGAAAGAATGCCCTCCAAGCCTATTATAATAAACGGTTTGAAGAAGAGTCCCGTCGTGTATATGATGAAACAAGACTTGAATTGAACCAGCTATTGTTTGAGTCAGTTATGAGATCATTGAAGGCTGCTGAATCGGAGAGGGAGGTTGATGATGTTGACTCAAAATTTAACTTGCATTTCCCTCCAGGGGAAGCTGGTGTTGATGAAGGGCAATATAAAAGACCTAAAAGGAAATCAACGTATAGTGCTTTCAGTAAGGCGGGGCTTTGGGAGGTTGCTAGCAAGTTTGGGCGTAGTGCCGAACAACTAGGGATGATGTTATCACTTGAAAAAATGATTAACGAGTTGGAGAATCCCAAGGAAACACCTGAAGAGATGGCTTCAAATTTTACATGTGCAATGTGTGATACACCTCAAGAAGTACTGAAATATGCTAGGCACATGGCAGCTGTTGAGATTAGTTGTGAACCTAGCATTAGGAAACATGTTCGTGCCAACTTTATTGACCATGCTGTGGTATCAACGTGTCCCACTGCTGATGGAAATGTAACTATAGATTCTTTCCATCAATTTGCTGGGATAAAGTGGTTGCGGGAGAAGCCTTTATCTAAATTTGAGGATGCACAATGGCTCCTTATACAGAAGGCAGAGGAGGAGAAACTCCTTCAAGTTACGATTAAGCTGCCTGAAGAGTATCTTGATAAGTTGACAAATGAATTCAATGATTATTATATCAGTGACAGTGTTAGTAGGTCTGCCCAACTGTGGAATGAACAGAGGAAGTTGATACTTCATGATGCAATTTTTCGCTTTCTCTTGCCGTCGATGGAAAAAGAGGCAAGATCTTATTTAACGAGTAAAGCAAAGAATTGGTTGCTCATGGAGTATGGGAAGGCATTGTGGAATAAGGTTTCTTTGGGGCCTTATCAACGAAAGGATAATGATCTTAGTGCTGATGAGGAGGCTGCCCCTAGGGTTATGGCTTGCTGTTGGGGTCCCGGTAAGCCGCAGACAACTTTTGTCATGTTAGATTCGTCTGGGGAAGTGCTAGATGTTCTTTACACTGGGTCCCTTACTTTACGGTCTCAAAATGTTAATGATCAGCGACGGAAGAAGAATGATCAGGAGCGTGTTTTGAAGTTCATGACAGACCACCAACCACATGTTGTTGTTCTAGGAGCAGTGAATTTGTCTTGTACTCGTTTGAAGGATGATATATATGAGATAATTTTTAAAATGGTGGAGGAAAATCCTAGAGATGTTGGGCATGAGATGGATGGCCTCAGCATTGTGTATGGGGATGAATCACTTCCACATTTATATGAAAATTCTCGAATTTCTTCTGAACAACTTCCCTCGCAGCAAGGTATAGTGAGGCGGGCAGTAGCACTTGGAAGGTATCTGCAGAATCCCTTGGCAATGGTTGCAACATTATGTGGACCTAGAAAAGAAATTTTATCATGGAAACTGAGTTCCTTGGAGAGCTTTCTCAACGCTGATGAGAAATTTGGGATGGTTGAGCAGATTATGGTGGATGTGACAAATCAGGTGGGCTTAGATGTCAATTTAGCCATAAGTCATGAGTGGCTATTTGCTCCTTTACAGTTTATTTCTGGGCTTGGTCCTAGAAAGGCTGCATCTTTACAGAGGTCCCTGGTAAGAGCTGGAGGAATTTTTACCCGGAAGGACTTTGTGACAGAACATAAGCTGGGTAAAAAGGTTTTTGTCAACGCAGTAGGTTTCTTGCGTATTCGGAGGAGTGGGTTGGCTGGTAGCAGCAGCCAATTTATTGATTTGCTAGATGATACAAGAATCCATCCGGAATCATATACACTTGCCCAAGAGCTGGCTAAAGATGTGTATGAGGCAGATGGTACAGGTGATGCAAATGATGATGATGATGCTCTGGAGATGGCTATAGAGCATGTGAGAGATCGGCCAAGTTATTTGAAAAACCTTGATGTTGAGGAATATGCTAAAGGGAAGAAGCGCATGAATAAAATAGAAACATTCTATGATATAAAAAGAGAACTGATTCAGGGTTTTCAGGATTGGCGTAAACAATACGAAGAACCAAATCAGGATGAGGAGTTCTATATGATATCAGGTGAAACTGAGGAGACCCTTGCTGAAGGAAAAATTGTCCAAGCTACAATTCGCAAAGTGCAAGCCCAAAAGGCCATATGTGTCCTTGAATCAGGGTTAACTGGAATTCTCATGAAAGAGGACTATGCAGATGACTCGAGGGATTTAGTTGAGTTATCTGATAGGCTACGTGAGGATGAAATCCTCACTTGCAAAATCAAATCAATTCAGAAGAATAGGTATCAGGTATTCCTTGTTTGTAGGGAGAGTGAAATGAGAAGTAATCGTTTACAGAGTAACCGTAATCTTGACCCCTATTATTACGAGGATCGGAGCTCTCAACAGAGTGAACAAGACAAAGCTCGCAAAGAAAAAGAGCTTGCAAAGAAACATTTCAAGCCTAGGATGATTGTTCACCCACGTTTTCAGAACATAACTGCAGATGAAGCAATGGAGTTCTTGTCTGACAAAGATTTTGGAGAAAGTATAATCCGGCCTAGCTCACGTGGACCTTCATACCTTACTTTAACCCTAAAAATCTATGATGGAGTTTATGCCCACAAAGATATAAGTGAAGGTGGAAAGGAACACAAGGATATCACAAGCTTACTGCGAATTGGGAAGACACTGAAAATTGGGGAGGACACTTTTGAGGATCTAGATGAGGTAATGGATCGCTATGTTGATCCCTTGGTAGTTCACCTAAAGGCAATGTTAAATTATCGCAAGTTCAAGAAGGGTACAAAAGCAGAAGTTGATGAACTTTTGAGGATGGAGAAAGCAGAGTGTCCTATGCGGATAGTCTACAGTTTTGGCATCTCTCATGAACATCCAGGCACATTCATATTGACTTATATAAGAAGTACGAATCCCCACCATGAGTACATTGGGCTTTATCCAAAAGGCTTCAAATTCCGGAAAAGGATGTTTGAGGACATTGATCGGCTTGTGGCATATTTCCAGAGGCACATTGATGATCCCCAGCATGGTGCAGCACCTTCCATTAGATCTGTTGCTGCTATGGTGCCCATGCGAAGCCCGGCCACTGGCGGATCTTCAGGGGCTTCAGTGGGTAGTGGGTGGGGTTCTAATGAGGGTGGCTGGAGAAATCATGCAGGTGATAGGGATCGTTCTTCGGCTCCGGGTTCCAGGACAGGGAGAACTGATCACAGAAACAGTGGGAATCGGGATGATCACCCCAGTGGTCTGCCCCGTCCATATGGTGGTGGACGTGGACGTGGTCGAGGTTCGTATAACAGTCGAGGAAACAACTCCAATAATGTAAGGCAGGATTCTGGCTTTAGTGCAGCCAGATGGGGTTCTGTCACAAAGGATGGAGATGATGGTTTAAGTAATTTTCCAGGAGCCAAGGTTCAAAATTCCCCAGGAAGGGAAGCCTTTCCTGGTGGTTGGGGGTCTGGTGGAGCCACTGGTTGGGGTGGTGGTGCTGGTGCTGGTGAAGGTGATGCAGAGCAAGGAACTTCTGGCTGGGGAAGTGGTCTCAAGAAATCTGATAATGGATGGTCTGGAAATGCTGGTGGTGGCACTGGCTGGTGA 4854 0.4363 MAKGVVSDDEDEVEFEEEEREPVDGEGMDEDEEEDEEEEGQDEYENDGFIVDDFEEEEEQDEEERADSDEERQKKKKRKKKEEYILDEDDYALLEDNNINIHRRKESKKFKRLKKGQRDTEDEPSGLSEEEEFDGSGKGGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEDDADIGEEDEMADFIVDEEEVDEHGAPMRRKKLKKKKARQAPGVSSSALQEAQELFGDVDELLQSRKQSLELREYRETRLEDEFEPVVLSEKYMTEKDDRIRELDIPERMQISEESTGAPPLDSVSVEEESRWIEDQLKKGTVPWIHKKDVGNLQIKAHDITRFLELHHGQKLDIPFIAMYRKEECLSLLKNLEQPDDENWDKNEKPPTLKWHKVLWAIQDLDHKWLLLQKRKNALQAYYNKRFEEESRRVYDETRLELNQLLFESVMRSLKAAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSTYSAFSKAGLWEVASKFGRSAEQLGMMLSLEKMINELENPKETPEEMASNFTCAMCDTPQEVLKYARHMAAVEISCEPSIRKHVRANFIDHAVVSTCPTADGNVTIDSFHQFAGIKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPEEYLDKLTNEFNDYYISDSVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARSYLTSKAKNWLLMEYGKALWNKVSLGPYQRKDNDLSADEEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQRRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPHLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEILSWKLSSLESFLNADEKFGMVEQIMVDVTNQVGLDVNLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGGIFTRKDFVTEHKLGKKVFVNAVGFLRIRRSGLAGSSSQFIDLLDDTRIHPESYTLAQELAKDVYEADGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYAKGKKRMNKIETFYDIKRELIQGFQDWRKQYEEPNQDEEFYMISGETEETLAEGKIVQATIRKVQAQKAICVLESGLTGILMKEDYADDSRDLVELSDRLREDEILTCKIKSIQKNRYQVFLVCRESEMRSNRLQSNRNLDPYYYEDRSSQQSEQDKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDFGESIIRPSSRGPSYLTLTLKIYDGVYAHKDISEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVVHLKAMLNYRKFKKGTKAEVDELLRMEKAECPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHGAAPSIRSVAAMVPMRSPATGGSSGASVGSGWGSNEGGWRNHAGDRDRSSAPGSRTGRTDHRNSGNRDDHPSGLPRPYGGGRGRGRGSYNSRGNNSNNVRQDSGFSAARWGSVTKDGDDGLSNFPGAKVQNSPGREAFPGGWGSGGATGWGGGAGAGEGDAEQGTSGWGSGLKKSDNGWSGNAGGGTGW 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0900 1617 Gene3D - 1109 1196 IPR012340 -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 131 156 - -
Mibi02g0900 1617 Pfam Holliday-junction resolvase-like of SPT6 727 883 IPR028231 -
Mibi02g0900 1617 SMART rnase_8s 728 846 IPR006641 GO:0006139
Mibi02g0900 1617 Gene3D SH2 domain 1224 1334 IPR036860 -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 894 991 - -
Mibi02g0900 1617 Gene3D SH2 domain 1336 1430 IPR036860 -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 290 472 - -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 158 193 - -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 475 739 - -
Mibi02g0900 1617 SUPERFAMILY Nucleic acid-binding proteins 1111 1191 IPR012340 -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 718 888 - -
Mibi02g0900 1617 Pfam Helix-hairpin-helix motif 887 988 IPR032706 -
Mibi02g0900 1617 SUPERFAMILY RuvA domain 2-like 899 989 IPR010994 -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 1224 1335 - -
Mibi02g0900 1617 Gene3D - 290 483 IPR023319 -
Mibi02g0900 1617 ProSiteProfiles S1 domain profile. 1116 1187 IPR003029 GO:0003676
Mibi02g0900 1617 SUPERFAMILY SH2 domain 1241 1327 IPR036860 -
Mibi02g0900 1617 Gene3D - 997 1089 IPR042066 -
Mibi02g0900 1617 Gene3D - 718 1108 IPR037027 GO:0006139
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 67 81 - -
Mibi02g0900 1617 Pfam SH2 domain 1206 1422 IPR035420 -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 9 66 - -
Mibi02g0900 1617 Pfam HHH domain 1003 1090 IPR041692 -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1445 1617 - -
Mibi02g0900 1617 PIRSF Spt6 3 1488 IPR017072 GO:0032968
Mibi02g0900 1617 CDD SH2_Nterm_SPT6_like 1238 1326 IPR035019 -
Mibi02g0900 1617 Coils Coil 51 71 - -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1596 1617 - -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 1109 1197 - -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 107 222 - -
Mibi02g0900 1617 FunFam Transcription elongation factor Spt6 995 1089 - -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1516 1536 - -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1202 1224 - -
Mibi02g0900 1617 SUPERFAMILY Tex N-terminal region-like 325 707 - -
Mibi02g0900 1617 SMART S1_6 1114 1187 IPR022967 -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1 81 - -
Mibi02g0900 1617 Gene3D - 257 991 - -
Mibi02g0900 1617 SUPERFAMILY Ribonuclease H-like 728 883 IPR012337 -
Mibi02g0900 1617 FunFam Transcription elongation factor spt6 1336 1429 - -
Mibi02g0900 1617 Gene3D - 484 921 IPR023323 -
Mibi02g0900 1617 SUPERFAMILY RuvA domain 2-like 1002 1091 IPR010994 -
Mibi02g0900 1617 MobiDBLite consensus disorder prediction 1468 1497 - -
Mibi02g0900 1617 Pfam Acidic N-terminal SPT6 30 119 IPR028083 -
Mibi02g0900 1617 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 11 1488 IPR017072 GO:0032968
Mibi02g0900 1617 CDD SH2_Cterm_SPT6_like 1337 1423 IPR035018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0900 Mibi-ChrMibi02 8737155 8745257 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0900 02 8737155 8745257 Mibi02g0900 02 8737155 8745257 ECH