LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g0851	ATGGAGTCGAGCATTCTTGAATCCATCGGCGTTGAGATAATCGGAGTGATGTCTCCTGTCTCCATCTGTATGTTCCTTGTTGTCCTCCTCGTTTATTCCCTCTCTGCCTCCAATCCCTTCTCTCCTGCTTCCGTTGATTCCATTCGCACCGCCGCTAACCTCGTCTATGTCGAAAACCCCTCCGATTCTGCTTCCCAGAAGCTCGAAGGCGCTCTCCTCAATGCCTTCGTCTTCGTCATCCTAATCACCATCGTCACTTTCCTCCTCTTCCTTCTTTACTACTATAACTTCACCAATTTCCTCAAGAACTACATGCGATTCTCCTCCTTCTTCATTCTTGCCACCATGGGTGGATCCATCTTCTTGGCCGTCATTCAGAAGTTCTCTATTCCCGTTGATTCCCTCACTTGTTTCATCCTCCTCCTCAATTTCTCCGTCGTCGGTGTTCTCTCCGTGTTTTCCGGTGGGATCCCCATTTTGCTGAGGCAAACGTATACAGTCTGTTTGGGGATTATTGTGGCTGCCTGGTTCACGAAATTGCCGGAGTGGACTACTTGGGTTTTGCTTGTCGCATTGGCTTTGTATGATTTGGTGGCTGTTTTGGCACCTGGTGGTCCGCTTAAGCTTTTGGTTGATTTGGCCTCAACTAGGGATGAAGAACTCCCTGCCCTAGTTTACGAGGCTCGTCCCACAGTCTCTCGAACTGGGAATCGTGGAGCCTCAAATTTGGGGTTTTTAGTCGCTGGGGTTTCAGATTCTTCCTCAATTGAGCTTCAAACGGTGTCAAGAGACAATGCCAATAGAAGTGAGAACGAGGGTCCCAGTAATGAGGAGAGTTCACCACTGGTGGGTAATGCACGAGAAAGGCATTCATTGAGTACTGAATTTAATGTCAGGGATGATGAGATTGTTGATGAGGAAACTTCTCCACTTGTGGAAATGATGGAAATGGGAGATGAAGGAAGGGAGAGGAGGGCTGGTGATGTGGAGATTGGTGAGAGAGGTATTAGACTTGGACTTGGAGACTTTGTTTTCTACAGTGTTCTTGTGGGTAGAGCTGCGATGTATGACCTTATGACAGTGTATGCTTGTTACCTTGCAATTATATCGGGATTAGGTTGCACTCTTATTTTGTTGTCAGTGTGCCGTCGAGCTCTGCCTGCGCTTCCTATTTCTATCGCACTGGGTGTCATTTTTTATTTCTTGACACGATTATTGATGGAGCCCTTCATTGTTGGGGCAGCCACGAATTTGATGATGTTCTGA	1266	0.4724	MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSASNPFSPASVDSIRTAANLVYVENPSDSASQKLEGALLNAFVFVILITIVTFLLFLLYYYNFTNFLKNYMRFSSFFILATMGGSIFLAVIQKFSIPVDSLTCFILLLNFSVVGVLSVFSGGIPILLRQTYTVCLGIIVAAWFTKLPEWTTWVLLVALALYDLVAVLAPGGPLKLLVDLASTRDEELPALVYEARPTVSRTGNRGASNLGFLVAGVSDSSSIELQTVSRDNANRSENEGPSNEESSPLVGNARERHSLSTEFNVRDDEIVDEETSPLVEMMEMGDEGRERRAGDVEIGERGIRLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISIALGVIFYFLTRLLMEPFIVGAATNLMMF	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g0851	421	FunFam	Presenilin	313	412	-	-
	Mibi02g0851	421	Pfam	Presenilin	10	411	IPR001108	GO:0004190\|GO:0016020\|GO:0016485
	Mibi02g0851	421	PRINTS	Presenilin family signature	196	213	IPR001108	GO:0004190\|GO:0016020\|GO:0016485
	Mibi02g0851	421	PRINTS	Presenilin family signature	179	186	IPR001108	GO:0004190\|GO:0016020\|GO:0016485
	Mibi02g0851	421	PRINTS	Presenilin family signature	17	27	IPR001108	GO:0004190\|GO:0016020\|GO:0016485
	Mibi02g0851	421	MobiDBLite	consensus disorder prediction	262	285	-	-
	Mibi02g0851	421	SMART	psh_8	69	407	IPR006639	GO:0004190\|GO:0016020
	Mibi02g0851	421	Gene3D	Presenilin	314	412	IPR042524	-
	Mibi02g0851	421	PANTHER	PRESENILIN	2	421	IPR001108	GO:0004190\|GO:0016020\|GO:0016485

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g0851	Mibi-ChrMibi02	8223178	8224443	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g0851	1	421	Miscellaneous Gene Families	AT1G08700	65.652	0.0	546

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi02g0851	02	8223178	8224443	Mibi02g0851	02	8223178	8224443	ECH