Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0793 ATGTCACGAATACAAATGAATGGTTTTGATCAAAATAAAATTTTAGTTGAATTTCTAGTAAGCGACCCAACTGTGAGTCAGTTGAAACAGACTATTCTTAACGATAAAGGAGAGATACAAAGAGGGGGAAATATGAGAGAAATAATAAGTATTCATATTGGTCAAGCTGGAATTCAGGTGGGGAATTCATGCTGGGAGCTTTATTGCCTCGAGCATCAAATTCAGCCCGATGGCTTGATGCCCAGTGATTCCTCAGTTGGCGTTGCAGATGATGCTTTTAACACCTTCTTCAGTGAGACTGGTTCAGGCAAGCATGTGCCAAGGGCTGTATTTGTTGATCTGGAACCTACTGTTATTGATGAAGTAAGGTCTGGTTCTTACAGACAACTCTTCCATCCCGAACAACTGATTTCTGGCAAGGAAGATGCTGCCAATAACTTTGCAAGGGGACATTATACGGTTGGAAAGGAAGTTGTTGACCTATGCCTTGACCGTGTGAGGAAATTAGCGGACAATTGTACTGGTTTACAAGGGTTCTTAGTTTTCAATGCTGTTGGTGGTGGCACTGGTTCTGGTCTGGGGTCATTGATCTTGGAACGATTGTCTGTAGATTATGGGAAGAAGTCAAAACTTGGCTTTACCATTTATCCTTCTCCTCAGATTTCTACTGCAGTCGTTGAACCTTACAACAGTGTCCTTTCTACTCATTCTCTTCTTGAGCACACTGATGTGGTTGTGCTTTTGGACAATGAAGCTATATATGATATCTGTAGAAGATCATTAGACATAGAAAGGCCAACTTACACAAACTTGAATCGTTTAATATCTCAAATTATCTCTTCCCTAACCACTTCCTTGAGATTTGATGGGGCAATTAATGTAGATATCACTGAGTTCCAGACCAACCTTGTGCCATACCCTCGTATCCATTTCATGCTCTCATCTTATGCCCCTGTAATCTCTGCTGCAAAAGCCTTCCATGAACAGCTATCAGTTCCTGAGATCACTAGTGCCGTCTTTGAGCCATCAAGCATGATGGCTAAGTGTGATCCAAGACACGGAAAATACATGGCATGCTGCCTCATGTACCGTGGAGATGTTGTGCCAAAAGATGTGAACAGTTCTGTTGCTACTATCAAGACAAAGCGGACAGTTCAATTTGTTGATTGGTGTCCTACTGGGTTCAAGTGTGGCATAAATTACCAGCCTCCAACAGTGGTACCTGGAGGTGATCTTGCCAAGGTACAGCGTGCGGTTTGTATGATAAGCAATAACACAGCAGTGGCAGAGGTTTTCGCCCGTATCGACCACAAATTCGATTTGATGTATGCTAAGCGAGCATTTGTGCACTGGTATGTGGGTGAGGGAATGGAAGAAGGTGAATTCTCAGAAGCACGTGAGGATCTTGCTGCTCTTGAAAAGGACTATGAAGAAGTTGGGGCAGAAGGCCTTGATGACGCAGAAGAAGATTACTGA 1476 0.4295 MSRIQMNGFDQNKILVEFLVSDPTVSQLKQTILNDKGEIQRGGNMREIISIHIGQAGIQVGNSCWELYCLEHQIQPDGLMPSDSSVGVADDAFNTFFSETGSGKHVPRAVFVDLEPTVIDEVRSGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEVVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLILERLSVDYGKKSKLGFTIYPSPQISTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAFHEQLSVPEITSAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNSSVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGLDDAEEDY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0793 491 CDD alpha_tubulin 46 479 - -
Mibi02g0793 491 Gene3D Tubulin/FtsZ, GTPase domain 45 312 IPR036525 -
Mibi02g0793 491 Gene3D - 313 427 IPR037103 -
Mibi02g0793 491 PRINTS Tubulin signature 54 74 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 178 196 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 97 116 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 424 452 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 222 235 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 236 256 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 139 150 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 152 176 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Tubulin signature 197 218 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 186 192 IPR017975 GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 Gene3D Helix hairpin bin 428 480 IPR023123 -
Mibi02g0793 491 Pfam Tubulin C-terminal domain 307 436 IPR018316 -
Mibi02g0793 491 SMART Tubulin_C_4 292 437 IPR018316 -
Mibi02g0793 491 Pfam Tubulin/FtsZ family, GTPase domain 47 257 IPR003008 GO:0005525
Mibi02g0793 491 Coils Coil 462 482 - -
Mibi02g0793 491 PRINTS Alpha-tubulin signature 62 77 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 404 423 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 258 270 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 89 102 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 132 145 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 164 172 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 365 386 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 429 445 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 391 404 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 466 482 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 205 216 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 318 333 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 PRINTS Alpha-tubulin signature 192 204 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Mibi02g0793 491 FunFam Tubulin alpha chain 45 312 - -
Mibi02g0793 491 SUPERFAMILY Tubulin nucleotide-binding domain-like 45 288 IPR036525 -
Mibi02g0793 491 FunFam Tubulin alpha chain 313 427 - -
Mibi02g0793 491 SMART Tubulin_4 93 290 IPR003008 GO:0005525
Mibi02g0793 491 PANTHER TUBULIN 46 482 IPR000217 GO:0005874|GO:0007017
Mibi02g0793 491 SUPERFAMILY Tubulin C-terminal domain-like 290 480 IPR008280 -
Mibi02g0793 491 FunFam Tubulin alpha chain 428 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0793 Mibi-ChrMibi02 7629886 7633922 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0793 02 7629886 7633922 Mibi02g0793 02 7629886 7633922 ECH