Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0728 ATGAAGAACAATGAAGAATCCAGATCAAAAAACAACAATAACCCTGTAAAGAGACCACGACGAGTGACAATAAACGATGTTCTTAAAGCATCCAAAGAGACGAAAGAAGAGAGGGAACAGAGGATCCTTAGCCTATTTAGTGTCTTTGATAAGGAAAATTCTGGTATTATAGATTATGCACAAATTGAAGCAGGTCTTTCTGCGCTTCATGTACCACCAGAACATAAACATGCCAAAGATTTCTTAAAAGCTTGTGATGCCAACAGAGACGGACGAGTCGATTATCAGGACTTCAAAAAGTACGTAGACAAAAAGGAAAATGAACTCTACCGCATATTTCAAGACATCGATGCTGAACGCATTGGATGCATCACGCCGGAAGAACTCTGTATGGCTCTGGTAAAAGCAGGGATCCAGATTGATGGAGAGGAAGTTGAACTTTTTATGGAGCATGTTGGCAAGGATAACAATGGGGTTATAACGTTTAAAAAATGGAGGGATTTTCTTCTGCTTTACCCAAAGGAGGCCACTATTGAGAACATTTTCCATTATTTAGAGCGTGTGTGCCTTATTGATATTGGGGAACAAACTGTGAGTCCTATAGGAATAAGTGGGAACATCCATGCAGTTAAGTATTTGCTCGCTGGAGGATTGGCAGGGGCAGTATCACGCACAGCAACTGCACCGCTTGATCGTTTAAAGATCATATTGCAAATCCAAACCACAAGAACTCATATAATGCCTGCACTTAAAAACATATGGAAACAAGATGGTTTCTTTGGGTTTTTTAGAGGCAATGGCTTAAATGTCCTAAAAGTGACCCCTGAGAGTGCTATAAGATTTTACACTTACGAGACACTCAAGACTTGGATGGCGAATTCTAAAGGAGATGATATTGGGACTGTGGGGCACGTGCTTGCTGGTGGTATGGCCGGTGGAATAGCTCAAACTATAATATATCCAATGGACCTTATAAAAACAAGAGTACAAACCTATGCTTATCGTGAAGGTATTGGAAAACTCTCAAAAGATATATGGGTTCAGGAAGGACCTCGTGCATTTTATAGGGGCCTGGTTCCTTCTCTTCTTGGGATTATCCCTTATGCTGGCATAGATATAGCTGCATATGAATCTTTGAAAGATATGTCCAAGAAGTACATTCTTCATGATGGAGAACCTGGCCCTCTTGTACAACTGGGTTGTGGGACGGTGTCAGGAGCTCTTGGAGCTACATGTGTCTATCCATTGCAGGTCGTTAGAACAAGAATGCAAGCTCAGCGCTCCAGTGCTGGAACAACTTATAATGGAATGACTGAAGTATTCAGGAGGACTTTTGAGCATGAAGGGTTTTGGGGATTCTACAAGGGGATATTTCCTAACCTTCTCAAAGTCATTCCATCGGCAAGCATCACTTATGTGCTTTATGAAACTATTAAAAAGAATTTGAAATTGGAGTGA 1458 0.4102 MKNNEESRSKNNNNPVKRPRRVTINDVLKASKETKEEREQRILSLFSVFDKENSGIIDYAQIEAGLSALHVPPEHKHAKDFLKACDANRDGRVDYQDFKKYVDKKENELYRIFQDIDAERIGCITPEELCMALVKAGIQIDGEEVELFMEHVGKDNNGVITFKKWRDFLLLYPKEATIENIFHYLERVCLIDIGEQTVSPIGISGNIHAVKYLLAGGLAGAVSRTATAPLDRLKIILQIQTTRTHIMPALKNIWKQDGFFGFFRGNGLNVLKVTPESAIRFYTYETLKTWMANSKGDDIGTVGHVLAGGMAGGIAQTIIYPMDLIKTRVQTYAYREGIGKLSKDIWVQEGPRAFYRGLVPSLLGIIPYAGIDIAAYESLKDMSKKYILHDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAQRSSAGTTYNGMTEVFRRTFEHEGFWGFYKGIFPNLLKVIPSASITYVLYETIKKNLKLE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0728 485 ProSiteProfiles Solute carrier (Solcar) repeat profile. 393 481 IPR018108 -
Mibi02g0728 485 Gene3D Mitochondrial carrier domain 203 483 IPR023395 -
Mibi02g0728 485 MobiDBLite consensus disorder prediction 1 23 - -
Mibi02g0728 485 ProSiteProfiles EF-hand calcium-binding domain profile. 140 175 IPR002048 GO:0005509
Mibi02g0728 485 ProSiteProfiles EF-hand calcium-binding domain profile. 37 72 IPR002048 GO:0005509
Mibi02g0728 485 SUPERFAMILY EF-hand 34 200 IPR011992 -
Mibi02g0728 485 Gene3D - 1 107 - -
Mibi02g0728 485 Pfam EF-hand domain pair 122 166 IPR002048 GO:0005509
Mibi02g0728 485 PANTHER SOLUTE CARRIER FAMILY 25 165 483 - -
Mibi02g0728 485 ProSiteProfiles Solute carrier (Solcar) repeat profile. 299 382 IPR018108 -
Mibi02g0728 485 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Mibi02g0728 485 SUPERFAMILY Mitochondrial carrier 207 477 IPR023395 -
Mibi02g0728 485 FunFam Mitochondrial substrate carrier family protein 203 483 - -
Mibi02g0728 485 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 265 285 IPR002067 GO:0055085
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 355 373 IPR002067 GO:0055085
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 225 239 IPR002067 GO:0055085
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 314 332 IPR002067 GO:0055085
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 402 424 IPR002067 GO:0055085
Mibi02g0728 485 PRINTS Mitochondrial carrier protein signature 212 225 IPR002067 GO:0055085
Mibi02g0728 485 SMART efh_1 41 69 IPR002048 GO:0005509
Mibi02g0728 485 SMART efh_1 77 105 IPR002048 GO:0005509
Mibi02g0728 485 SMART efh_1 108 136 IPR002048 GO:0005509
Mibi02g0728 485 SMART efh_1 144 172 IPR002048 GO:0005509
Mibi02g0728 485 Pfam Mitochondrial carrier protein 207 293 IPR018108 -
Mibi02g0728 485 Pfam Mitochondrial carrier protein 394 482 IPR018108 -
Mibi02g0728 485 Pfam Mitochondrial carrier protein 298 385 IPR018108 -
Mibi02g0728 485 Gene3D - 122 195 - -
Mibi02g0728 485 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 290 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0728 Mibi-ChrMibi02 7010866 7012932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0728 6 485 EF-hand Containing Proteins AT5G51050 62.705 0.0 630
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0728 02 7010866 7012932 Mibi02g0728 02 7010866 7012932 ECH