Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0727 ATGGTCACCGTCGAGGAGATCCGCAACGCCCAGCGATCCCGCGGCCCAGCCGCCATCCTCGCCTTCGGCACCGCCACCCCCTCCAACTGCGTCCTACAATCCGACTACCCCGACTACTACTTCCGCATCACCCAGAGCGAGCACATGACTGACCTCAAAGAGAAGTTCAAGCGCATGTGTGAGAAATCCATGATTAAGAAGCGTTACATGCACATAACGGAGGAGTTACTGAAGGAGAACCCTAACATGTGCGCATACATGGCTCCATCCTTGGACGCACGTCAAGACATGGTGGTGGTTGAGGTGCCAAAGCTAGGGAAAGAGGCTGCGGTGAAGGCCATTAAGGAGTGGGGCCAGCCCAAATCCAAGATCACCCATCTAGTCTTCTGCACCACCTCCGGTGTAGACATGCCCGGCGCCGACTACCAGCTCACCAAGCTCCTCGGCCTCCGTCCCTCCGTCAAGCGCCTCATGATGTACCAGCAGGGCTGCTTCGCCGGCGGCACCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACAAGGGGGCCCGCGTCCTCGTCGTCTGCTCCGAGATCACCGCCGTCACATTCCGCGGCCCCTCCGACACCCACCTCGACTCCCTCGTCGGGCAGGCCCTCTTCGGCGACGGAGCCGCCGCCATGATCATCGGCGCCGACCCCGACACCGCCGTGGAGCGCCCCATCTTCGAGATGGTCTCCGCCGCCCAGACCATCTTGCCGGACTCAGACGGCGCCATCGACGGCCACCTCCGGGAGGTGGGGCTCACCTTCCATTTACTGAAGGACGTGCCAGGGATCATATCAAAGAACATAGAGAAGAGCTTGGTGGAGGCTTTTACACCGATTGGGATCAATGATTGGAATTCGATTTTCTGGATCGCGCATCCTGGTGGGCCGGCGATTTTGGACCAGGTGGAGGAGAAGTTGGGCCTGAAGGAGGAGAAGCTGGCGGCCACTAGGCACGTGCTGAGCGAGTATGGGAACATGTCGAGCGCGTGTGTGATATTTATATTGGATGAGGTGAGGAAGAGGTCGAGGATTGAAGGGAAGGGTACCACCGGAGAAGGCTTGGAGTGGGGCGTTTTGTTCGGGTTTGGGCCGGGTCTTACGGTCGAGACCGTGCTTTTGCACAGTGTTCCCGTTTGA 1170 0.5974 MVTVEEIRNAQRSRGPAAILAFGTATPSNCVLQSDYPDYYFRITQSEHMTDLKEKFKRMCEKSMIKKRYMHITEELLKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTAVERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSIFWIAHPGGPAILDQVEEKLGLKEEKLAATRHVLSEYGNMSSACVIFILDEVRKRSRIEGKGTTGEGLEWGVLFGFGPGLTVETVLLHSVPV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0727 389 Pfam Chalcone and stilbene synthases, C-terminal domain 238 388 IPR012328 -
Mibi02g0727 389 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Mibi02g0727 389 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Mibi02g0727 389 FunFam Chalcone synthase 2 1 235 - -
Mibi02g0727 389 CDD CHS_like 16 384 - -
Mibi02g0727 389 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Mibi02g0727 389 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Mibi02g0727 389 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 387 IPR011141 GO:0009058|GO:0016747
Mibi02g0727 389 FunFam Chalcone synthase 1 236 388 - -
Mibi02g0727 389 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Mibi02g0727 389 Gene3D - 236 388 IPR016039 GO:0016746
Mibi02g0727 389 Gene3D - 1 235 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0727 Mibi-ChrMibi02 7003564 7005542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0727 138 374 Miscellaneous Gene Families AT2G46720 24.910 3.17e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0727 02 7003564 7005542 Mibi02g0727 02 7003564 7005542 ECH