Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0630 ATGCCATCCATAGACAAACTAGAGATTGTTACACATTATTATATGCCATATATGGATAAAGCTACTCAATATGGGCGTGTGTTTGAACTGTTTGACGGAGACGGGGATGGGAGGATATCGGCGACGGAGCTACGGCAATGTGTGGTGGCGATAGGCGGTGAGTTGACCGAGGAGGAGGCGGAGGCGGCGGCTGAGTATTTGGATGCCGACGGAGACGGGCTTGTGGGGTTTGAGGACTTTGTAAGTTTTGTGGAGGGAGGAGAAGAGGAAGAGAAAGTGAAAAATTTGAGGGAAGCGTTTAAGATGTATGAGATGGAAGGAAGTGGGTGCATAACACCAAAGAGTTTGAGCAGAATGTTGGGCAGATTGGGTGAATCTAAAAGTGTAGATGAATGTGAAGTCATGATCTCTAGATTTGATCTCAATGGTGATGGCGTCCTCACTTTCGATGAATTTAAGGTCATGATGTTGTGA 474 0.462 MPSIDKLEIVTHYYMPYMDKATQYGRVFELFDGDGDGRISATELRQCVVAIGGELTEEEAEAAAEYLDADGDGLVGFEDFVSFVEGGEEEEKVKNLREAFKMYEMEGSGCITPKSLSRMLGRLGESKSVDECEVMISRFDLNGDGVLTFDEFKVMML 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0630 157 ProSiteProfiles EF-hand calcium-binding domain profile. 19 54 IPR002048 GO:0005509
Mibi02g0630 157 PANTHER CALCIUM BINDING PROTEIN 91 156 - -
Mibi02g0630 157 ProSitePatterns EF-hand calcium-binding domain. 68 80 IPR018247 -
Mibi02g0630 157 CDD EFh 96 156 IPR002048 GO:0005509
Mibi02g0630 157 ProSiteProfiles EF-hand calcium-binding domain profile. 91 126 IPR002048 GO:0005509
Mibi02g0630 157 CDD EFh 26 83 IPR002048 GO:0005509
Mibi02g0630 157 Gene3D - 89 157 - -
Mibi02g0630 157 FunFam Calmodulin A 3 87 - -
Mibi02g0630 157 SUPERFAMILY EF-hand 21 156 IPR011992 -
Mibi02g0630 157 Pfam EF-hand domain pair 108 156 IPR002048 GO:0005509
Mibi02g0630 157 Pfam EF-hand domain pair 26 84 IPR002048 GO:0005509
Mibi02g0630 157 Gene3D - 3 88 - -
Mibi02g0630 157 FunFam Calcium-binding protein CML38 88 157 - -
Mibi02g0630 157 ProSiteProfiles EF-hand calcium-binding domain profile. 127 157 IPR002048 GO:0005509
Mibi02g0630 157 ProSiteProfiles EF-hand calcium-binding domain profile. 55 90 IPR002048 GO:0005509
Mibi02g0630 157 ProSitePatterns EF-hand calcium-binding domain. 140 152 IPR018247 -
Mibi02g0630 157 ProSitePatterns EF-hand calcium-binding domain. 32 44 IPR018247 -
Mibi02g0630 157 SMART efh_1 131 157 IPR002048 GO:0005509
Mibi02g0630 157 SMART efh_1 59 87 IPR002048 GO:0005509
Mibi02g0630 157 SMART efh_1 95 123 IPR002048 GO:0005509
Mibi02g0630 157 SMART efh_1 23 51 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0630 Mibi-ChrMibi02 6178125 6178598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0630 8 156 EF-hand Containing Proteins AT1G76650 48.322 1.87e-44 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0630 02 6178125 6178598 Mibi02g0630 02 6178125 6178598 ECH