Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0409 ATGGAGTCCTGCGATTGCATTGAACCACAGAATTGGCCCATAGATGAACTTGTCACGAAATTTCAGTACATATCGGATATTCTGATAGCGCTTGCATATTTCTTGATTCCTCTGGAACTGATATATTTTGTGAAGAAGACTGCTTTCTTCCCATATAGATGGGTTCTTATCCAGTTCGGAGCTTTCATTATTCTCTGTGGAACATCCCACTTCGCAAGCCTCTGGACATTCTTCATGAACACTAAGGTTATTGCTATGGTTATGGCAATAGCTAAGGCCTTGTGTGCTATTATATCCTGTGCTACTGCACTAATGCTTGTTCACATCATCCCTGATTTTCTGAGCGTCAAAACTCGAGAACGCCTTCTCAAGAACAAGGCTGAAGAACTTGACAGAGAAATGGGACTTATTCTTACACAAGAAGAAACTGGGAGGCATGTAAGAATGTTAACTCATGAGATTAGGAACACACTTGATAGGCGTACCATTCTCAATACTACTCTTATTGAGTTGGGTCGAACTTTGGGCTTGGAGGAATGTGCACTGTGGATGCCATCAAGATGTGGTCTTGAACTTCAACTTTCACATACATTAAGTGGTGCACAAGTTAGTTACTGTGTCCCAACAAGTCTTCCTGTCGTTAATGAAGTTTCCAGTGGTCATAAGGCGAAGAGAATACCACACACATGTCCCCTGGTCACTGTTAAACCAATGGCCGGAAGATACGGGACGCCTGAGGTGGTTGCTGTGAGAGTGCCTCTTTTGCATCTCTCAAATTTCCCAATTAAAGATTGGCCTGATCTTTCTGCCAAGAGGTATGCAATCATGGTCTTGATTCTCCCTACTGACAGTGCTAGGAAATGGCGAGATCATGAATTGGAACTAGTTGAAGTAGTAGCAGATCAGGTGGCAGTTGCTCTTTCACATGCTGCTATATTGGAGGAGTCTATGAGAGCCCGGGATCAACTCATGGAACAGAATGTTCACTTAGATATGGCACGGCGGGAAGCAGAAGGGGCGGTCCTGGCTCGTAATGATTTCTTTTCTATCACGAACCATGAGATAAGGATACCGATACGAGCTTTAATGGCATTGTCGTCGCTTCTCTTGGAGACTGAATTGACTCCTGAGCAGAGAATCATGATAGAGACAACATTGAAGAATAGCAACATGTTGGCAACACTTGTTAGCGATGTTCTAGATCTTTCTAAACTTGAAGATGGTAGCCTTCGATTAGAATTGGTAAAATTCAACCTTCACGAGGCTCTGGCAGAGGTCATTGGCTTGATAAAGCCTATAGCATCTGTGAAGAAGCTACCTGTGACTTTAACTTTGGACCCTGATATGCCTGTTTTTGCCATTGGAGATGAGAAACGTATAATGCAAACTCTTTTAAATGTAGTGGGTAATGCTGTGAAATTCACGAAACAGGGTTATGTTTCTGTGAGAGCATCTATTGCGAAACCAAAAGTCTTGCAGGATTGGCGAACTCCAGAATTTTACCCAGCTGCAAGTGCTGATCATTATTACATTATAATACAGGTTAAGGATTCTGGATGTGGCATTTCCCCACAAGATATTCCTCTTATTTTTACGAAATCTGCCGAGTCTCAAAGAGGATCAAGCAGTGGTGCAGGGATTGGACTAGCCGTTTGTAAGAGATTGGTGAAAGTGATGGGAGGTGACATGTGGATTGAGAGTGAAGGCATAGGCAAAGGGACTACAAATACATTTATAGTGAAGCTTCGTATTTGA 1755 0.4268 MESCDCIEPQNWPIDELVTKFQYISDILIALAYFLIPLELIYFVKKTAFFPYRWVLIQFGAFIILCGTSHFASLWTFFMNTKVIAMVMAIAKALCAIISCATALMLVHIIPDFLSVKTRERLLKNKAEELDREMGLILTQEETGRHVRMLTHEIRNTLDRRTILNTTLIELGRTLGLEECALWMPSRCGLELQLSHTLSGAQVSYCVPTSLPVVNEVSSGHKAKRIPHTCPLVTVKPMAGRYGTPEVVAVRVPLLHLSNFPIKDWPDLSAKRYAIMVLILPTDSARKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVHLDMARREAEGAVLARNDFFSITNHEIRIPIRALMALSSLLLETELTPEQRIMIETTLKNSNMLATLVSDVLDLSKLEDGSLRLELVKFNLHEALAEVIGLIKPIASVKKLPVTLTLDPDMPVFAIGDEKRIMQTLLNVVGNAVKFTKQGYVSVRASIAKPKVLQDWRTPEFYPAASADHYYIIIQVKDSGCGISPQDIPLIFTKSAESQRGSSSGAGIGLAVCKRLVKVMGGDMWIESEGIGKGTTNTFIVKLRI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0409 584 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 397 581 IPR036890 -
Mibi02g0409 584 CDD HisKA 343 404 IPR003661 GO:0000155|GO:0007165
Mibi02g0409 584 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 584 - -
Mibi02g0409 584 SMART gaf_1 159 317 IPR003018 GO:0005515
Mibi02g0409 584 FunFam Ethylene receptor 1 310 406 - -
Mibi02g0409 584 FunFam Ethylene response sensor 137 308 - -
Mibi02g0409 584 Gene3D - 408 584 IPR036890 -
Mibi02g0409 584 Gene3D - 309 407 - -
Mibi02g0409 584 SUPERFAMILY GAF domain-like 162 310 - -
Mibi02g0409 584 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Mibi02g0409 584 SMART HKATPase_4 455 584 IPR003594 -
Mibi02g0409 584 ProSiteProfiles Histidine kinase domain profile. 350 584 IPR005467 -
Mibi02g0409 584 Gene3D - 139 308 IPR029016 -
Mibi02g0409 584 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 329 409 IPR036097 GO:0000155|GO:0007165
Mibi02g0409 584 Pfam GAF domain 159 307 IPR003018 GO:0005515
Mibi02g0409 584 PRINTS Bacterial sensor protein C-terminal signature 543 561 IPR004358 GO:0016310|GO:0016772
Mibi02g0409 584 PRINTS Bacterial sensor protein C-terminal signature 511 525 IPR004358 GO:0016310|GO:0016772
Mibi02g0409 584 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 583 IPR003594 -
Mibi02g0409 584 FunFam Ethylene receptor 1 408 584 - -
Mibi02g0409 584 Pfam His Kinase A (phospho-acceptor) domain 344 408 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0409 Mibi-ChrMibi02 4113695 4116013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0409 1 584 Miscellaneous Gene Families AT1G66340 67.177 0.0 814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0409 02 4113695 4116013 Mibi02g0409 02 4113695 4116013 ECH