Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0275 ATGTATGCTTTGACTCTAATAGCTCTTGTATTTATCTATATTTTGTGCGAGAAGCTCTTCTTCCCAGCTTCAAGCAGCTGCATCTACAGTGACATCTACTTAAGAAAGGCATATAGTGTTTGTGTTCTCTTGATCATGAGGTCCAAGCATGTGTGGATAGCTTTCTGTTTATGGGCTTTAACATGCTCACTTCTGCCTTCTTTCTCTTATGGGATTCTAAGAATTGGTTTGAGGAAGAGACCTCTAGACCTTCAAAGAATCCGGGCTGCAAGAGCTGCAAGGGAAGAATTGAGACCAGGAAGACCTGTGAAGGGTTCATATCAGTATATTAGTAATTCACATGATGAAGATATACTGCCTCTCAAAAATTATATGGATGCACAATATTTTGGAGAGATTGGAATAGGCACACCTCCGCAGACCTTCACTGTCATATTTGATACTGGCAGTTCCAACCTGTGGGTTCCATCATCATGGTGCTATTTTTCAATTGCCTGTTATGTCCATTCTTGGTACAAAGCTAGCAAATCCAGTACATACATTGAGAATGGAACATCATGTGAAATAAAATATGGGTCTGGATCATTATCTGGTTTTTTCAGTCAAGATGACGTTAAAGTTGGTGATGTGGTCGTGAAGCATCAAGATTTCATTGAGGCTACTCGAGAGAAAAGTTTTTCCTTTGCACTCGCTAAGTTTGATGGGATACTTGGACTTGGGTTTCAGGAAATCTCGGTTGAGAAAGCTGTGCCGGTTTGGTATAGTATGTTGGATCAAGAACTTGTTAGTGAGAAGGTGTTCTCTTTTTGGCTCAATGTGGACCCGGATGCAGAAGCAGGTGGTGAAATTGTATTTGGAGGTGTTGATCCAAATCACTTCAAAGGACAACATACTTATGTTCCAATCACTAGAAAAGGTTACTGGCAGATCGAAATAGGAGATTTCCTCATTGGAGGTCTTTCAACAGGTGTGTGCAAGGGTGGGTGTGCTGCTATAGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACCTCAGTTGTGGCTGAAATCAACAATGCCATTGGAGCTGAAGGAGTTGTGAGTTCAGAATGCAAGCAAATAGTTTCTCAATATGGAGAAAAAATATGGGATCTATTAGTATCAGGGGTGGAGCCTGATGAAGTATGTTCACAACTTGGTCTATGCTCTGCATATAGGGACCAATCTAAGGGCAACGGGATCAAAATGGTGACTGAAGCAATAAAAAGAGAGGGCATGTCAGCTAGAGATGATAATATGTGCTCTCTGTGTGAAATGGCTGTCGTTTGGGTCCAGAATCAACTAAGACGGAAGGTGACCAAGGAAAAAGTAATCCACTACATAAATCAGTTGTGTGAAAGACTGCCAAGCCCTGGTGGAGAATCCACAATAAGTTGTGATGGTCTTTCTCAGATGCCAAACATTACAATTACTATCGGAGATGAACTTTTCAACCTCACTCCGGAGCAGTATATTCTGAAAACTGGAGAAGGAGATGCGGCAGTCTGCCTCAGTGGGTTTACAGCTTTTGATATTCCCCCTCCTCAGGGCCCACTCTGGATCCTTGGCGATGTTTTTATGAGGGTATATCATACGGTGTTTGATTATGGCAATCTCCAAGTAGGTTTTGCTGAAGCTGCCTAG 1662 0.4212 MYALTLIALVFIYILCEKLFFPASSSCIYSDIYLRKAYSVCVLLIMRSKHVWIAFCLWALTCSLLPSFSYGILRIGLRKRPLDLQRIRAARAAREELRPGRPVKGSYQYISNSHDEDILPLKNYMDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSWCYFSIACYVHSWYKASKSSTYIENGTSCEIKYGSGSLSGFFSQDDVKVGDVVVKHQDFIEATREKSFSFALAKFDGILGLGFQEISVEKAVPVWYSMLDQELVSEKVFSFWLNVDPDAEAGGEIVFGGVDPNHFKGQHTYVPITRKGYWQIEIGDFLIGGLSTGVCKGGCAAIVDSGTSLLAGPTSVVAEINNAIGAEGVVSSECKQIVSQYGEKIWDLLVSGVEPDEVCSQLGLCSAYRDQSKGNGIKMVTEAIKREGMSARDDNMCSLCEMAVVWVQNQLRRKVTKEKVIHYINQLCERLPSPGGESTISCDGLSQMPNITITIGDELFNLTPEQYILKTGEGDAAVCLSGFTAFDIPPPQGPLWILGDVFMRVYHTVFDYGNLQVGFAEAA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0275 553 SMART sapb_4 323 395 IPR008139 -
Mibi02g0275 553 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 63 551 IPR001461 GO:0004190|GO:0006508
Mibi02g0275 553 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 144 155 IPR001969 GO:0004190|GO:0006508
Mibi02g0275 553 FunFam Lysosomal aspartic protease 401 552 - -
Mibi02g0275 553 Gene3D - 359 462 - -
Mibi02g0275 553 FunFam Aspartic proteinase A1 359 462 - -
Mibi02g0275 553 Pfam Saposin-like type B, region 1 426 462 IPR007856 GO:0006629
Mibi02g0275 553 FunFam Lysosomal aspartic protease 115 357 - -
Mibi02g0275 553 Gene3D Acid Proteases 73 287 IPR021109 -
Mibi02g0275 553 SUPERFAMILY Acid proteases 54 552 IPR021109 -
Mibi02g0275 553 Pfam Saposin-like type B, region 2 363 395 IPR008138 -
Mibi02g0275 553 ProSiteProfiles Saposin B type domain profile. 359 399 IPR008139 -
Mibi02g0275 553 SUPERFAMILY Saposin 360 462 IPR011001 -
Mibi02g0275 553 Gene3D Acid Proteases 288 553 IPR021109 -
Mibi02g0275 553 PRINTS Pepsin (A1) aspartic protease family signature 135 155 IPR001461 GO:0004190|GO:0006508
Mibi02g0275 553 PRINTS Pepsin (A1) aspartic protease family signature 331 342 IPR001461 GO:0004190|GO:0006508
Mibi02g0275 553 PRINTS Pepsin (A1) aspartic protease family signature 281 294 IPR001461 GO:0004190|GO:0006508
Mibi02g0275 553 PRINTS Pepsin (A1) aspartic protease family signature 526 541 IPR001461 GO:0004190|GO:0006508
Mibi02g0275 553 Pfam Eukaryotic aspartyl protease 128 552 IPR033121 -
Mibi02g0275 553 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 331 342 IPR001969 GO:0004190|GO:0006508
Mibi02g0275 553 ProSiteProfiles Saposin B type domain profile. 423 464 IPR008139 -
Mibi02g0275 553 ProSiteProfiles Peptidase family A1 domain profile. 129 550 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0275 Mibi-ChrMibi02 2719944 2724421 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0275 02 2719944 2724421 Mibi02g0275 02 2719944 2724421 ECH