Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0253 ATGGCCCCTGATATCACCACCGCTGCAGCCAACGCCGCCGCCGCACAAGCCAAGACGGCAAGCCGTGCTTACGTCACTTTTCTCGCCGGAAACGGTGACTACGTGAAGGGTGTGGTGGGACTGGCCAAAGGTCTCAGAAAAGCAAAGAGCATATACCCACTTGTTGTTGCCATGTTGCCTGATGTTCCAGAGGATCACCGCAAGATTCTGATCTCTCAAGGATGCATTCTGAAGGAGATCGAACCTGTTTACCCCCCGGAGAATCAAACCCAGTTCGCCATGGCCTACTATGTCATCAACTACTCCAAGCTTCGTATTTGGAATTTTGTGGAGTACAGCAAGATGATATACCTGGATGGAGATATCCAAGTATTTGACAACATTGACCATCTTTTTGATCTGCCTAATGACCGTTTCCATGCCGTGATGGACTGTTTCTGTGAGAAGACATGGAGCCAGTCCCCACAGTACCAGATTGGGTATTGCCAGCAGTGTCCTGATAAGGTGGCTTGGCCTGCTAGTATGGGGCCCAAGCCAGCTCTCTATTTCAACGCTGGAATGTTCGTTTTCGAGCCCAATCTTTCCACTTATAATGACCTCCTCAAAACCGTCCAAGTCACTGTTCCTACCATTTTCGCTGAACAGGATTTTCTGAACATGTACTTTAGGGACAAGTACAGCCCCATACCGAACAATTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAATGTTCAGCTTAACGATGTCAAAGTGGTTCACTACTGTGCTGCTGGCTCAAAACCATGGAGGTACACAGGGGAAGAGGAGAACATGGACAGGGAAGATATAAAGATGCTGGTGAAGAAGTGGTGGGAGATATATGAGGATGAGACATTGGACTATGAGAATGCTGTGAATGTTGATCGTATCAAGGGGGCATTAACAGAGGCTGGTGGTCTTCACTATGTCCCAGCTCCTTCCGCTGCATAG 978 0.4877 MAPDITTAAANAAAAQAKTASRAYVTFLAGNGDYVKGVVGLAKGLRKAKSIYPLVVAMLPDVPEDHRKILISQGCILKEIEPVYPPENQTQFAMAYYVINYSKLRIWNFVEYSKMIYLDGDIQVFDNIDHLFDLPNDRFHAVMDCFCEKTWSQSPQYQIGYCQQCPDKVAWPASMGPKPALYFNAGMFVFEPNLSTYNDLLKTVQVTVPTIFAEQDFLNMYFRDKYSPIPNNYNLVLAMLWRHPENVQLNDVKVVHYCAAGSKPWRYTGEEENMDREDIKMLVKKWWEIYEDETLDYENAVNVDRIKGALTEAGGLHYVPAPSAA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0253 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 299 IPR029044 -
Mibi02g0253 325 FunFam Hexosyltransferase 20 298 - -
Mibi02g0253 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 295 IPR029044 -
Mibi02g0253 325 CDD GT8_Glycogenin 22 292 - -
Mibi02g0253 325 Pfam Glycosyl transferase family 8 26 268 IPR002495 GO:0016757
Mibi02g0253 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 11 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0253 Mibi-ChrMibi02 2528709 2529980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0253 1 325 Glycosyltransferase AT1G56600 76.119 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0253 02 2528709 2529980 Mibi06g2705 06 46992927 46994248 CCT
Mibi02g0253 02 2528709 2529980 Mibi02g0253 02 2528709 2529980 ECH