Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2358 ATGGCTTCTTCTGTGCTCTCTTCCGCCGCCGTCGCCGCCACCACCGCTCAGAGCAACAAGATCTCAGCCTTCAACGGCCTTAAGGCAGGAGGCTTGCCAGTGAGCAAGAAGACAATCAACACAGACATCACCTCCATTGTTAGCAATGGTGGCAGAGTAAGCTGCATGCTGGTGTGGCCCCCACTAGGCAAGAAGAAGTTTGAGACTCTCTCCTACCTCCCGCCCCTTAACGATGCGGCTCTGGCCAAGGAAGTTGACTACCTTCTCAGAAAGGGATGGGTTCCTTGCTTGGAGTTCGAGGTTGGGTACCCATTTGTGTACCGTGAGCACCACAGGTCACCAGGGTACTATGATGGAAGGTACTGGACAATGTGGAAGCTGCCCATGTTTGGATGCACAGACTCAGCTCAGGTGATAAATGAGGTGCAGGAGGCCAAGAAGGCATACCCTCAGGCTCACGTCAGAATCATCGGTTTCGACAGCTATCGCCAAGTTCAGTGCATCAGCTTCATCGCCTACAGGCCACCCAGCCCTTGA 537 0.5419 MASSVLSSAAVAATTAQSNKISAFNGLKAGGLPVSKKTINTDITSIVSNGGRVSCMLVWPPLGKKKFETLSYLPPLNDAALAKEVDYLLRKGWVPCLEFEVGYPFVYREHHRSPGYYDGRYWTMWKLPMFGCTDSAQVINEVQEAKKAYPQAHVRIIGFDSYRQVQCISFIAYRPPSP 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2358 178 Hamap Ribulose bisphosphate carboxylase small subunit [cbbS]. 65 176 IPR000894 -
Mibi01g2358 178 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC 1 176 IPR024681 -
Mibi01g2358 178 SUPERFAMILY RuBisCO, small subunit 56 176 IPR036385 -
Mibi01g2358 178 SMART RuBisCO_small_2_a 66 175 IPR000894 -
Mibi01g2358 178 CDD RuBisCO_small 65 175 IPR000894 -
Mibi01g2358 178 Pfam Ribulose bisphosphate carboxylase, small chain 67 175 IPR000894 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 17 34 IPR024681 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 65 91 IPR024681 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 149 175 IPR024681 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 115 144 IPR024681 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 93 108 IPR024681 -
Mibi01g2358 178 PRINTS RuBisCO small subunit signature 44 62 IPR024681 -
Mibi01g2358 178 FunFam Ribulose bisphosphate carboxylase small chain, chloroplastic 56 178 - -
Mibi01g2358 178 Gene3D Ribulose bisphosphate carboxylase, small subunit 56 178 IPR036385 -
Mibi01g2358 178 Pfam Ribulose-1,5-bisphosphate carboxylase small subunit 2 40 IPR024680 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2358 Mibi-ChrMibi01 37747490 37748523 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2358 01 37747490 37748523 Mibi01g2358 01 37747490 37748523 ECH