Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1989 ATGGCGATCTCCCCACATCTTTGCAGTCTCTCCGCTACTCGCACCGACTTCGCCTTGCCGTTGCCTGAGAGCTTCTCTAAGACATCTTCTTTCCGATGCAGCTGGAAGCCTCTCTCCATTAGATGCTCCTCTGATTCTTCTTCTTCTTCTCCTTCTTCCGCTGAAGTGGATTCCGATTTCGATGCCAAGGTTTTCCGCAAGAATCTAACCAGGAGTGAGAATTATAATCGCAAAGGATTTGGGCACAAGGAAGCCACCCTCGAACTTATGAATCGCGAGTACACCAGTGACGTCATCAAGACCTTGAAGGAAAATGGATATGAGTATACATGGGGTAATGTCACGGTGGCGCTGGCTGAAGCTTATGGCTTCTGCTGGGGAGTTGAACGGGCTGTTCAAATTGCTTACGAGGCTAGAAAACAGTTTCCCACCGAAACAATCTGGCTTACCAACGAAATCATCCACAACCCAACTGTTAATAAGCGATTAGAAGAGATGAAAGTGCAGAATATTCCTTTGAAGGAGGGAAATAAACAATTTGATGTTGTCAACAAGGGCGATGTTGTGGTTTTGCCTGCTTTTGGAGCTGCAGTGGATGAGATGTTGACTTTGAGTGAGAAAAATGTACAAATTGTTGATACGACTTGCCCATGGGTTGTAAAGGTCTGGAATACGGTTGAAAAGCACAAGCAACGAGAGTACACATCAGTCATACATGGTAAATATGCTCATGAGGAAACTGTAGCAACTGCATCATTTGCTGGGAAGTATATCATTGTGAAGAATATGGCTGAGGCTGAATATGTTTGTGACTACATTCTTGGTGGTGGACTTAATGGATCCAGTTCAACGAGAGATGCATTTTTAGAGAAATTTAAATTTGCTGTTTCTGAAGGGTTTGACCCAGACGTTGATTTGATTAAAGTGGGCATTGCTAACCAAACAACAATGCTCAAGGGAGAAACTGAAGACATTGGCAAACTATTAGAAAGGACTATGATGCGGAAATATGGTGTGGAAAACGTCAATGAACACTTTTTAAGCTTCAACACCATTTGTGATGCTACTCAGGAGAGACAAGATGCGATGTACAAACTGGTGGAGAAAGATTTGGATCTTATGCTAGTAGTTGGTGGGTGGAACTCAAGCAATACATCACACCTGCAAGAGATCGCTGAAGAACGTGGGATTCCTTCTTACTGGATTGACAGTGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAATTGATGCACGGTGAGCTGGTGGAGAAAGAAAACTTTCTACCAGAGGGTCCGATAACAATTGGCATAACTTCTGGTGCATCCACACCTGACAAGGTGGTTGAAGACGTGCTCATCAAGGTGTTTGACTTGAAACGTGAAGAAGCATTGCAGGTCGCTTGA 1410 0.4376 MAISPHLCSLSATRTDFALPLPESFSKTSSFRCSWKPLSIRCSSDSSSSSPSSAEVDSDFDAKVFRKNLTRSENYNRKGFGHKEATLELMNREYTSDVIKTLKENGYEYTWGNVTVALAEAYGFCWGVERAVQIAYEARKQFPTETIWLTNEIIHNPTVNKRLEEMKVQNIPLKEGNKQFDVVNKGDVVVLPAFGAAVDEMLTLSEKNVQIVDTTCPWVVKVWNTVEKHKQREYTSVIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGGLNGSSSTRDAFLEKFKFAVSEGFDPDVDLIKVGIANQTTMLKGETEDIGKLLERTMMRKYGVENVNEHFLSFNTICDATQERQDAMYKLVEKDLDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLMHGELVEKENFLPEGPITIGITSGASTPDKVVEDVLIKVFDLKREEALQVA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1989 469 TIGRFAM ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 116 456 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mibi01g1989 469 CDD lytB_ispH 118 454 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mibi01g1989 469 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 6 467 - -
Mibi01g1989 469 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 114 461 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mibi01g1989 469 Gene3D - 216 349 - -
Mibi01g1989 469 Gene3D - 125 215 - -
Mibi01g1989 469 Gene3D - 350 468 - -
Mibi01g1989 469 Pfam LytB protein 116 455 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1989 Mibi-ChrMibi01 29099280 29103469 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1989 01 29099280 29103469 Mibi01g1989 01 29099280 29103469 ECH