Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1888 ATGGCGCAGCCACTCGTTAAGAAGGACGACGACCGCGACGATGAAGCTGAGTATTCTCCCTTTCTGGGAATTGAGAAGGGTGCTGTTCTTCAGGAAGCCAGGGTTTTCAATGACCCACAACTTGATGCCAGGAGATGTTCACAGGTTATCACGAAACTTTTATACCTATTGAATCAAGGAGAGACATTTACCAAGATCGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTTCAGTCTAGGGATATTGGGTTGAGGAGGATGGTCTACCTGATGATAAAGGAGCTTTCTCCCTCAGCAGATGAGGTGATAATTGTGACAAGCTCTCTCATGAAGGACATGAATAGCAAGACCGATATGTACAGGGCAAATGCTATTCGTGTACTTTGTCGTATTACAGATGGAACCCTCCTTACCCAAATTGAGAGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTTGCAAGTGCAGCCCTTGTCAGTGGCATTCATCTACTCCAGACAAATCCTGAGATTGTGAAAAGATGGAGCAATGAGGTTCAAGAAGCTGTTCAATCAAGAGCAGCTCTTGTGCAGTTTCATGCACTCGCTTTGCTACATCAGATTAGGCAGAATGATCGCCTAGCTGTTAGTAAATTGGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTGGCCCAATGCCTTTTGATCCGTTATACCAGTCAGGTTATTCGTGAGTCCAGCAACAATACACAAACAGGGGACCGTCCATTTTATGATTTTCTTGAGAGCTGCCTTCGTCACAAATCAGAGATGGTGATTTTTGAAGCAGCCAGAGCAATTACTGAGCTCAATGGTGTAACGAATCGGGAATTAACTCCAGCAATTACTGTTCTTCAGCTCTTCTTAAGTTCTTCTAAGCCAGTGTTGAGATTCGCTGCTGTCCGCACATTGAACAAGGTTGCAATGACACATCCAATGGCTGTCACCAACTGCAACATTGACATGGAAAGTTTAATCTCTGACCAAAACAGAAGCATTGCCACACTTGCAATAACTACGCTGTTGAAGACAGGAAATGAATCCAGTGTGGACCGTCTTATGAAGCAGATCACAAATTTTATGTCAGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGATGCCATAAGATCATTGTGTTTAAAGTTTCCCTTGAAATATCGATCTCTGATGAACTTCTTGAGTAACATTCTTCGGGAAGAAGGTGGATTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATAAGAGATATTCCGGATGCAAAGGAGAGTGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAATTCACTTATTTGTCCACACAGATACTGCACTTCCTGGGAGTGGAAGGGCCAAAAACATCTGACCCCAGCAAATATATACGTTACATATATAATAGAGTACATCTTGAGAATGCAACTGTCAGGGCCAGTGCTGTTAGCACTTTGGCTAAGTTTGGTGCCGCAGTTGAATCATTAAAGCCCCGGATATTTGTTCTGCTACGGCGATGTCTTTTTGACAGTGATGATGAGGTTCGTGATAGGGCAACACTGTATCTTGATACACTTGGAGGAGATGGTACAGTTTTAGAGACTGATAAAGATGTCAAGGACTTTCTCTTCGGTTATTTTGATATCCCCCTCGTGAATCTGGAGAATAGTTTGAAACATTATGAGCCTTCGGAAGAACCTTTTGACATCAACTCTGTGCCTAAGGAGGTTAAGTCTCAGCCACTTGCAGAGAAAAAAGCACCAGGCAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCTCCATCCACTGCAGATGCATATGAAAGGCTGCTAGGCTCCATTCCTGAGTTTTCAAACTTTGGGAAGCTCTTCAAGTCCTCACCACCTGTAGAACTTACTGAAGCAGAGACAGAATATGCAGTCAATGTTGTTAAGCACATATTTGATAAGCATGTTGTGTTCCAGTACAACTGTACAAACACTATACCAGAGCAATTACTGGAAGATGTTACTGTAGTTGTAGATGCCTCAGATGCTGAGGAATTTTCTGAGGTTTTCTCCAAGCCTCTCAGGTCTCTTCCTTATGACTCCCCTGGGCAGACATTTGTGGCCTTTGAGAAGCCAGAAGGATTGCCTACAGTTGGAAAATTTTCCAACACTCTTAAGTTCATTGTTAAAGAGGTTGACCCATCCACTGGTGAGGCAGAAGATGATGGTGTGGAAGATGAATACCAGCTGGAGGACTTGGATGTTGCTGCTGCTGATTACATGTTGAAACTGGGGGTATCTAACTTTAGAAATGCATGGGAAAACATGGATCCTGATGCTGAGCGAGTGGATGAATATGGACTTGGCCCTAGAGAGAGCTTGGCTGAAGCTGTAAATACTGTCATTAATCTTCTTGGCATGCAGCCCTGTGAGGGCACGGAGACTGTCCCACCCAATGCAAGGTCACACACGTGTCTATTGTCCGGTGTATTCATAGGGAATGTAAAGGTTCTTGTGCGCTTGTCCTTTGGACTTGATGGTCAAAGGGATGTTGCAATGAAACTGGCAGTTAGATCGGAGGATGAATCGGTCAGTGATGCCATCCATGAGATTGTGGCAAGCGGCTAG 2664 0.4362 MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIRESSNNTQTGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTLAKFGAAVESLKPRIFVLLRRCLFDSDDEVRDRATLYLDTLGGDGTVLETDKDVKDFLFGYFDIPLVNLENSLKHYEPSEEPFDINSVPKEVKSQPLAEKKAPGKKPTGLGAPPSGPPSTADAYERLLGSIPEFSNFGKLFKSSPPVELTEAETEYAVNVVKHIFDKHVVFQYNCTNTIPEQLLEDVTVVVDASDAEEFSEVFSKPLRSLPYDSPGQTFVAFEKPEGLPTVGKFSNTLKFIVKEVDPSTGEAEDDGVEDEYQLEDLDVAAADYMLKLGVSNFRNAWENMDPDAERVDEYGLGPRESLAEAVNTVINLLGMQPCEGTETVPPNARSHTCLLSGVFIGNVKVLVRLSFGLDGQRDVAMKLAVRSEDESVSDAIHEIVASG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1888 887 Pfam Adaptin N terminal region 29 539 IPR002553 GO:0006886|GO:0016192|GO:0030117
Mibi01g1888 887 FunFam Coatomer subunit gamma 23 316 - -
Mibi01g1888 887 Gene3D Coatomer, gamma subunit, appendage domain 617 768 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Mibi01g1888 887 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 770 884 IPR032154 -
Mibi01g1888 887 Pfam Coatomer gamma subunit appendage platform subdomain 622 767 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Mibi01g1888 887 Gene3D - 333 552 IPR011989 -
Mibi01g1888 887 Gene3D - 23 316 IPR011989 -
Mibi01g1888 887 SUPERFAMILY ARM repeat 29 540 IPR016024 -
Mibi01g1888 887 Gene3D - 769 885 IPR012295 -
Mibi01g1888 887 FunFam Coatomer subunit gamma 769 885 - -
Mibi01g1888 887 PIRSF Gamma-COP 7 885 IPR017106 -
Mibi01g1888 887 SUPERFAMILY Clathrin adaptor appendage domain 617 771 IPR013041 -
Mibi01g1888 887 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 772 884 IPR009028 GO:0006886|GO:0016192|GO:0030117
Mibi01g1888 887 FunFam Coatomer subunit gamma 615 768 - -
Mibi01g1888 887 PANTHER COATOMER SUBUNIT GAMMA 1 885 IPR017106 -
Mibi01g1888 887 MobiDBLite consensus disorder prediction 578 620 - -
Mibi01g1888 887 FunFam Coatomer subunit gamma 333 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1888 Mibi-ChrMibi01 27690275 27697443 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1888 01 27690275 27697443 Mibi01g1888 01 27690275 27697443 ECH