Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1866 ATGGCTTCCTCATGGGTGACCTTGAAAGCCAATACCCACATACCAAAAGCAAGTCAAGGAGATCTCTTTCGCCATGATAATGGGTTTTTAGGTGAGAGAATCAAGAACAGGAATTGCATGAGTCCCTTTGTAAATTCGTCGACTTCAAGTTTGACACATAGGAAGAGGGTTAAGATGATCAAAACTGGTGTTGTTTCTGCTGTTCTTACATCAAATGATACCACAGCAACTCTGGTTGACTACCAGACCTTACAGGTTCCTTCGTTTCTGAGACGAAAGGCTGACCCCAAAAATGTAATTTCCATCATATTGGGTGGAGGACCTGGAAAACAACTCTTTCCCCTCACCAAACGAGCTGCAACACCTGCTGTACCTGTTGGTGGATGCTACAGACTTATAGACATTCCAATGAGCAACTGTATCAACAGCGGCCTTAACAAAATCTTTGTACTCACCCAATTCAATTCTGCATCTCTGAACCGTCATATCTCACGCACATTTGGTCACGGTGTCAGCTTTGGGGATGGGTTTGTGGAGGTTCTAGCAGCTACTCAGACACCTGGAGAAGCAGGGAAGAAGTGGTTCCAAGGGACTGCAGATGCTGTGAGACAATTTACATGGGTATTTGAGGATGCCAAGAACACAAACGTTGAGAATGTATTGATCTTGGCAGGAGATCATCTTTACAGAATGGATTACATGGACCTTGTGCAGAGCCATGTTGACCGAAATGCTGATATTACAATTTCATGCGCACCAGTGGGTGACAGCCGCGCCTCAGATTATGGATTGGTCAAGGTAGATGGCAGAGGCCGCATCGACCAATTTTTGGAAAAACCAAAGGGTGCTGATTTGAAAGCAATGCAAGTGGATACCTCTTTTATCGGCTTGTCGCACAAAGATGCATTAGAATCACCTTATATAGCATCCATGGGTGTTTATGTATTTAAGACAGATGTTCTGCTCAAGCTTTTGAAATGGAGATATCCTACATCCAATGACTTTGGATCTGAAATCATTCCTGCAGCAGTGAGGGAGCACAATGTCCAATCATATTTTTTCAGAGACTACTGGGAAGACATTGGAACAATAAAGTCCTTTTACAATGCTAACCTTGCCCTTACTGAAGAGAATCCAAACTTTGAATTTTATGATCCCAAAACACCCATTTTCACATCTCCTCGTTTCCTCCCACCAACAAAGATTGACAAGTGTCAGATTGTGGATGCTATAATCTCTCATGGATGTTTCCTTCGAGAATGTACTGTCCGACGCTCCATCGTGGGTGAACGTTCTCGTCTGGATCATGGCGTTGAGCTCCTGGACACTATAATGTTGGGAGCAGACTATTACCAAACTGAATCTGAAATCGCTTCTCTGCTAGCAGAAGGGAAGGTCCCAATTGGGATTGGGAGCAATACAAAAATTAAGAACTGTATAATTGACAAGAACGCAAGGATCGGGAAAGATGTGGTGATCATGAATAAAGATGGAGTTCAAGAAGCAGATAGAGCGGATGATGGGTTTTACATTCGATCAGGGATCACAGTCATAATGGAGAAGGTTACAATAGAAGATGGCACTGTGATATGA 1593 0.4325 MASSWVTLKANTHIPKASQGDLFRHDNGFLGERIKNRNCMSPFVNSSTSSLTHRKRVKMIKTGVVSAVLTSNDTTATLVDYQTLQVPSFLRRKADPKNVISIILGGGPGKQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGLNKIFVLTQFNSASLNRHISRTFGHGVSFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITISCAPVGDSRASDYGLVKVDGRGRIDQFLEKPKGADLKAMQVDTSFIGLSHKDALESPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPAAVREHNVQSYFFRDYWEDIGTIKSFYNANLALTEENPNFEFYDPKTPIFTSPRFLPPTKIDKCQIVDAIISHGCFLRECTVRRSIVGERSRLDHGVELLDTIMLGADYYQTESEIASLLAEGKVPIGIGSNTKIKNCIIDKNARIGKDVVIMNKDGVQEADRADDGFYIRSGITVIMEKVTIEDGTVI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1866 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 105 124 IPR005836 GO:0005978|GO:0008878
Mibi01g1866 530 SUPERFAMILY Trimeric LpxA-like enzymes 392 530 IPR011004 -
Mibi01g1866 530 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 395 IPR029044 -
Mibi01g1866 530 CDD ADP_Glucose_PP 102 361 - -
Mibi01g1866 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 309 319 IPR005836 GO:0005978|GO:0008878
Mibi01g1866 530 FunFam Glucose-1-phosphate adenylyltransferase 396 530 - -
Mibi01g1866 530 Gene3D Hexapeptide repeat proteins 396 530 - -
Mibi01g1866 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 194 202 IPR005836 GO:0005978|GO:0008878
Mibi01g1866 530 FunFam Glucose-1-phosphate adenylyltransferase 81 395 - -
Mibi01g1866 530 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 46 530 IPR011831 GO:0005978|GO:0008878
Mibi01g1866 530 Pfam Nucleotidyl transferase 101 376 IPR005835 GO:0009058|GO:0016779
Mibi01g1866 530 CDD LbH_G1P_AT_C 398 524 - -
Mibi01g1866 530 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 99 494 IPR011831 GO:0005978|GO:0008878
Mibi01g1866 530 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 492 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1866 Mibi-ChrMibi01 27441246 27444848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1866 01 27441246 27444848 Mibi01g1866 01 27441246 27444848 ECH