Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1853 ATGTCTACAGTGTACACGGAGCGTGATCCATACCCCACTCACTCTCCTAGTCTCCTCTCTCCTGTGCTTGGCGGCATTCCGCGTCGTCAACTGTGGTTTTGGATTTTCGTGGGTTTCATCTTTTTCTGGATAAAGCTGGGATTTTTGCGGAAGGTTTTTTTTTTTTGTGGGGTCGGGGTTCCCTGCTACCTTCTGCGTTTTCGCTCTGAGATCGGTGTGTACGTCTTGTGCAATAGTATTGCGTGTTTGATGCGATTTGAAGTTGAAATTGAAAAGCGGATTCTGGGAGACTTTCCTGTTTATGAGTTTGATGATTTAGACCTTACATTGTCTTCGTATCATTTTTGGGTTCCGCTCAACTTACAAAAGAGTTGGTTGCAGACTTTTTTTCAGATCGCGCCTTTAAATATTTCTCGTCTTTGGAATCATATCATGGCCAGTGACTCTGTTGTAATGTCCAATGGCAATGCGAACTCACATCCTAATCAACTGAGGAATTACCAAGTGGTTGTAGCTGCAACCCGGGATATGGGTATTGGTAAGGATGGGAAACTACCATGGAAACTGCCTGCTGATCTAAAATTTTTTAAGGAGGTCACTTCAATGACATCTGATACAGGGAAGAAGAATGCAGTGATTATGGGTAGAAAAACATGGGAGAGTATCCCTCTTGAGAATCGTCCTCTTCCTGGTCGCCTTAATGTTGTTCTTACTCGCTCAGGAAGCTTTGACATTGCAACTGCAGAGAATGTTGTTATATGTGGAAGTATGTCTTCCGCATTGGAACTGTTAGCTGCTTCTCCATACTGTCTATCAATTGAGAAAGTATTTGTTATAGGAGGTGGCCAGATATTTAGAGAGGCTCTAAATGCACCTGGATGTGAAGCTATACACATTACTGAAATCGAGACAGATATTGACTGTGATACTTACATGCCTTCAATTGATTCCTCTGTATTTCAGCCTTGGTACTCTTCCTTTCCTGTGGTGGAGAACAACATCCGCTATTGTTTTACCACATTTGTACGGGTTAGGAGTTCTATAGAAGAATCCCTGAGTCAGAATTCTGATCAGATTTGTGATACTAGATCAGTTCCCTCAAAATTTGAGGTCAAGAACTTCTCTTTCCTTCCTAAAATGATTTTTGAGAGACATGAGGAGAACATTTATCTCAATCTGGTCCAAGAAATAATATCTGAAGGCACTGCTAAGGATGATAGGACTGGGACTGGCACCTTCTCAAAATTTGGTTGCCAGATGAGGTTTAATTTGCGCAGAAGCTTTCCTCTTTTGACAACAAAGAAAGTATTTTGGCGAGGAGTCGTTGAAGAGCTTCTTTGGTTTATAAGTGGCTCAACAAATGCAAAGGTGCTGCAAGAAAAAGGCATACATATATGGGATGGCAATGCATCCAGAGAATACCTTGATAGTGTTGGATTGGCAGAGAGGGAGGAGGGTGACTTGGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGAGCCAAATATACTGACATGCATGCTGACTACTCTGGCAAAGGATTTGATCAACTTTTAGATGTTATTAACAAGATAAAGCATAAACCTGATGATCGGCGGATTATTCTCTCGGCTTGGAATCCGGTAGATCTTAAATTGATGGCCCTTCCACCCTGCCATATGTTTTCACAGTTCTATGTGGCAAATGGTGAGTTATCTTGTCAAATGTATCAGCGATCTGCGGACATGGGCCTCGGTGTGCCCTTTAATATTGCATCTTATGCTCTACTGACATGCATGATTGCACAAGTTTGTGAGCTTGTTCCTGGCGATTTTATCCATGTTATTGGGGATGCACATGTTTATCGCAATCACGTGAGACCTTTGCAGGAGCAGCTCCGGAACCTTCCTAAACCTTTTCCGATTTTGAAGATAAACCCAAAGAAGGACATAGATTCTTTTGTAGCTTCTGATTTCAAACTCATAGGCTATGATCCTTACCAGAAGATAGAAATGAAGATGGCTGTGTAA 2010 0.4209 MSTVYTERDPYPTHSPSLLSPVLGGIPRRQLWFWIFVGFIFFWIKLGFLRKVFFFCGVGVPCYLLRFRSEIGVYVLCNSIACLMRFEVEIEKRILGDFPVYEFDDLDLTLSSYHFWVPLNLQKSWLQTFFQIAPLNISRLWNHIMASDSVVMSNGNANSHPNQLRNYQVVVAATRDMGIGKDGKLPWKLPADLKFFKEVTSMTSDTGKKNAVIMGRKTWESIPLENRPLPGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYCLSIEKVFVIGGGQIFREALNAPGCEAIHITEIETDIDCDTYMPSIDSSVFQPWYSSFPVVENNIRYCFTTFVRVRSSIEESLSQNSDQICDTRSVPSKFEVKNFSFLPKMIFERHEENIYLNLVQEIISEGTAKDDRTGTGTFSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASREYLDSVGLAEREEGDLGPVYGFQWRHFGAKYTDMHADYSGKGFDQLLDVINKIKHKPDDRRIILSAWNPVDLKLMALPPCHMFSQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAQVCELVPGDFIHVIGDAHVYRNHVRPLQEQLRNLPKPFPILKINPKKDIDSFVASDFKLIGYDPYQKIEMKMAV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1853 669 Pfam Dihydrofolate reductase 168 343 IPR001796 GO:0004146|GO:0046654
Mibi01g1853 669 FunFam Possible thymidylate synthase 381 669 - -
Mibi01g1853 669 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 166 343 IPR001796 GO:0004146|GO:0046654
Mibi01g1853 669 Gene3D Dihydrofolate Reductase, subunit A 147 344 IPR024072 -
Mibi01g1853 669 Hamap Thymidylate synthase [thyA]. 387 669 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 ProSitePatterns Thymidylate synthase active site. 532 560 IPR020940 GO:0004799|GO:0006231
Mibi01g1853 669 TIGRFAM thym_sym: thymidylate synthase 389 669 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 CDD TS_Pyrimidine_HMase 389 623 IPR023451 -
Mibi01g1853 669 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 150 344 - -
Mibi01g1853 669 PANTHER THYMIDYLATE SYNTHASE 1 190 669 IPR045097 GO:0016741
Mibi01g1853 669 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 376 669 IPR036926 -
Mibi01g1853 669 SUPERFAMILY Dihydrofolate reductase-like 160 343 IPR024072 -
Mibi01g1853 669 CDD DHFR 170 342 IPR001796 GO:0004146|GO:0046654
Mibi01g1853 669 Pfam Thymidylate synthase 389 669 IPR023451 -
Mibi01g1853 669 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 178 200 IPR017925 GO:0004146
Mibi01g1853 669 PRINTS Thymidylate synthase family signature 521 540 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 PRINTS Thymidylate synthase family signature 428 449 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 PRINTS Thymidylate synthase family signature 547 562 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 PRINTS Thymidylate synthase family signature 603 620 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 PRINTS Thymidylate synthase family signature 565 591 IPR000398 GO:0004799|GO:0006231
Mibi01g1853 669 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 366 669 IPR036926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1853 Mibi-ChrMibi01 27170706 27177318 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1853 01 27170706 27177318 Mibi01g1853 01 27170706 27177318 ECH