Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1852 ATGTGTGACACTACTTTGATGCCTGATCCTCTTAAATTGGGTATTGAAAATGAATACTCGGAGGAAGAAAGGAAGAAAAGAGTTGGAGCTATAAAGAAGATGGCAAGAAGTGCTTCAAGTAAGTTCAAGAAATCCTTTTCAAAGAGGGGTCGCAGGCACAGCAGGGTTGCGTCAATTGAGGATGACATTGATGCAGAAGAGTTGCAAGCGGTTGATGCTTTTCGCCAAATGCTTATTTTGGATGAATTATTACCTGCCAATTATGATGATCATCATATGATGTTAAGATTCTTGAAAGCAAGAAAGTTTGACTTTGAGAAGTCAAAGCAAATGTGGGAAGATATGCTTCAATGGAGAAATGAATTTGGTGCTGACACTATCATGGAGGAAATAGACGAAGTTATAAAATACTACCCACAAGGGCATCATGGAGTTGATAAGGATGGAAGACCTGTTTACATTGAAAAACTGGGTCAGGTTGATCCTAACAAGCTCTTGCAAGTGACATCACTGGATCGCTATGTTAAGTATCATGTAAGAGAGTTTGAAAGAACTTTTGTTGTGAAGTTTCCTGCCTGTTCAATTGCAGCAAAGAAGCACATTGACCAGAGCACAACTATTTTGGACGTGCAAGGAGTGGGACTGAAAAATTTCAACAAAGCTGCAAGGGATCTGATTCAGAGGATTCAGAAGATTGATGGAGACAACTATCCTGAGACCTTGAACCGTATGTTCATCATCAATGCTGGCTCTGGATTTAGGCTCTTGTGGAACACTGTGAAGTCATTCCTTGACCCCAAGACCTCTGCAAAGATCCATGTTCTAGGCAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATACCAGTGAACTTCCAGAGTTCTTGGGAGGTACTTGTACTTGTGAAGATAAAGGTGGTTGCATGCTCTCAGACAAAGGACCATGGAATGACCCAGAAATCTTCAAGATGGTTCAAAATGGTGAGGGAAAATGCAAAAGGAGGGCCTTGGCTGGTATTGAGGAGAAAACAATAAATGAGGACGAAGTAATTTACCAAAAGGGAAGCGATTCTTTCAAGAACGTAACGTATTTATCACCAATAGTGGAGCAAGCCAAACTAGAAATTGCAAAGCAAATGAGTGGCTACAGTTATGATGTGACACTCCCAATGGTGGACAAAACAATTGATTCACCATGGTCAAGTGCAAAAGATAATCTAGCCATTTCCACAGATTGTTTAGCTGCCAAGACTAGTGATAATTTGAATGGTCCAATAGTAGGAAGGTTCATGACATTAATAATGGGAATAGTGACAATGATTAAGGTGACAAAGAACATCACCACAAATTACGACGGAACCGCCGCCAAGACTTTAAAAGGGCACCGTATGTTGCCGGCGGCGCCGCCACCAGAAGTTGCCGGCGGCGACCACATGTTGCTGATGAAGCGCATGACTGAGCTTGAGGAAAAGGTCAATGCTCTCGCTTGTAAACCTCCAATGCCTCCAGAAAAGGAGGAAATGTTGAATACTGCTCTTGCTAGAGTTAGTGCTCTGGAGAATCAATTGAATGAAGCCAAAAAGGAGCTTAATGATGCACTCGCTCGAACAGGACAGCTCCAAGCAGCCATTGATAAGAGGAGGAAAAGGAGACTTGTATTTCCGCTGGTAAAGCTGAAGGAAAGGACGCAAGTGGTATTGAAAATGAGTTGGCCATCTTCATAA 1725 0.4209 MCDTTLMPDPLKLGIENEYSEEERKKRVGAIKKMARSASSKFKKSFSKRGRRHSRVASIEDDIDAEELQAVDAFRQMLILDELLPANYDDHHMMLRFLKARKFDFEKSKQMWEDMLQWRNEFGADTIMEEIDEVIKYYPQGHHGVDKDGRPVYIEKLGQVDPNKLLQVTSLDRYVKYHVREFERTFVVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDLIQRIQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTSAKIHVLGNKYQSKLLEIIDTSELPEFLGGTCTCEDKGGCMLSDKGPWNDPEIFKMVQNGEGKCKRRALAGIEEKTINEDEVIYQKGSDSFKNVTYLSPIVEQAKLEIAKQMSGYSYDVTLPMVDKTIDSPWSSAKDNLAISTDCLAAKTSDNLNGPIVGRFMTLIMGIVTMIKVTKNITTNYDGTAAKTLKGHRMLPAAPPPEVAGGDHMLLMKRMTELEEKVNALACKPPMPPEKEEMLNTALARVSALENQLNEAKKELNDALARTGQLQAAIDKRRKRRLVFPLVKLKERTQVVLKMSWPSS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1852 574 Pfam CRAL/TRIO, N-terminal domain 90 114 IPR011074 -
Mibi01g1852 574 SMART sec14_4 130 301 IPR001251 -
Mibi01g1852 574 PRINTS Cellular retinaldehyde-binding protein signature 93 115 - -
Mibi01g1852 574 PRINTS Cellular retinaldehyde-binding protein signature 257 276 - -
Mibi01g1852 574 PRINTS Cellular retinaldehyde-binding protein signature 290 299 - -
Mibi01g1852 574 SUPERFAMILY CRAL/TRIO domain 129 326 IPR036865 -
Mibi01g1852 574 Gene3D - 19 121 - -
Mibi01g1852 574 SMART CRAL_TRIO_N_2 90 115 IPR011074 -
Mibi01g1852 574 CDD SEC14 129 299 IPR001251 -
Mibi01g1852 574 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 130 304 IPR001251 -
Mibi01g1852 574 SUPERFAMILY CRAL/TRIO N-terminal domain 60 130 IPR036273 -
Mibi01g1852 574 FunFam SEC14 cytosolic factor 120 330 - -
Mibi01g1852 574 Gene3D - 122 338 IPR036865 -
Mibi01g1852 574 Pfam CRAL/TRIO domain 136 298 IPR001251 -
Mibi01g1852 574 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 17 547 - -
Mibi01g1852 574 Coils Coil 509 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1852 Mibi-ChrMibi01 27147166 27153829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1852 69 295 Acyl Lipid Metabolism Gene Families AT5G47730 29.046 4.46e-21 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1852 01 27147166 27153829 Mibi01g1852 01 27147166 27153829 ECH
Mibi01g1852 01 27147166 27153829 Mibi10g0029 10 585853 587048 ECH