Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1794 ATGGAGAGTACAGGTTCAGAGACACCAAAGAAGAAAAGTGGTGGTGGAAATGGACAGGTTCTGGATGGTTCGAATATAATGGAGTTAGTTGGGAACGATCGAGTGTTTGACAATTTTGTGGACCATAAGTTTGAGGAGCTTGATAGGGATAGAGACGGTAAGCTCTCCGTGAAGGAGCTTGAGCCTGCCGTTGCTGATATTGGTGCCGCCCTTGGTTTGCCAGCTCAGGGCTCTAATCCCGATTCCGATCACATCTATTCTGAGGTCTTGAATGAATTCACCCATGGCAAACAAGAGAAAGTGAACAAGACTGAGTTCAAAGAGGTACTCTCGGACATTCTGTTGGGCATGGCTGCCGGGCTGAAACGAGACCCAATAGTGATACTTCGTATGGATGGGGAAGATCTCCTTGAGTTTGTTGGTGGACTAAGTTATGAAGCAGAAATGGCTTCTATATTGTCCCAGATTGAGTCTCCTGATGCTTCACTCCGTGAGCATATAATTGGAGCTCTGGGAAAACTCACAGTTGAGCATGGAGTCCCTCCCACTTCAGATTCTTGGGTTTTTGATAACATTGTGGAACCAGTTCTACAATCTCAAGCTGGCCCAGATTGGGATAAACCTGCTTCTCAAGAGACTTTTTTTGTGGAATTTAAGAAAGTAGCATCAGCGGTGGCTGATCATCTGAAGGAGCAACCTGTCATTGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGCATCAAGAGACTATTGTCCAACAAGTTTGAATTAGACAAGATCTTGAACTCAGCTTTAGAAAATTTACCTAAAGATCGCAACGGAAAACTGTCCAAGGAATATCTGCGGGTGGCACTTGATGTGGTGTCTCCATCTGCCGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTGTTCAAGATGATAAATGTAGATGATGGGAAGTTGGTTAAAGAAGACGAATTCAAGAAATTATTAGCTGAAATACTGGGGAGCATCATGTTGCAGTTAGAGGGCAGTCCCATATCTGTTTCTTCAAATTCAGTTGTGCATGAGCCTCTCGGCTCTTCTTCTTCGCTCTTGCAGCCGCCATCTGCTAATGAAATGGCATAG 1131 0.4456 MESTGSETPKKKSGGGNGQVLDGSNIMELVGNDRVFDNFVDHKFEELDRDRDGKLSVKELEPAVADIGAALGLPAQGSNPDSDHIYSEVLNEFTHGKQEKVNKTEFKEVLSDILLGMAAGLKRDPIVILRMDGEDLLEFVGGLSYEAEMASILSQIESPDASLREHIIGALGKLTVEHGVPPTSDSWVFDNIVEPVLQSQAGPDWDKPASQETFFVEFKKVASAVADHLKEQPVIVAHSENTFDGSGIKRLLSNKFELDKILNSALENLPKDRNGKLSKEYLRVALDVVSPSAGLPPVGAIEEMDKVIGEVFKMINVDDGKLVKEDEFKKLLAEILGSIMLQLEGSPISVSSNSVVHEPLGSSSSLLQPPSANEMA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1794 376 SUPERFAMILY EF-hand 43 344 IPR011992 -
Mibi01g1794 376 MobiDBLite consensus disorder prediction 1 23 - -
Mibi01g1794 376 SMART efh_1 307 335 IPR002048 GO:0005509
Mibi01g1794 376 SMART efh_1 39 67 IPR002048 GO:0005509
Mibi01g1794 376 SMART efh_1 261 289 IPR002048 GO:0005509
Mibi01g1794 376 Gene3D - 17 121 - -
Mibi01g1794 376 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 131 355 - -
Mibi01g1794 376 ProSitePatterns EF-hand calcium-binding domain. 48 60 IPR018247 -
Mibi01g1794 376 ProSiteProfiles EF-hand calcium-binding domain profile. 35 70 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1794 Mibi-ChrMibi01 26229417 26233129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1794 19 366 EF-hand Containing Proteins AT4G38810 70.085 1.52e-175 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1794 01 26229417 26233129 Mibi01g1794 01 26229417 26233129 ECH