Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0757 ATGACTTCAAACTTATATTATACTCAAGAAAGCATGGATCAAACGATTTTGAGTGTTGATCTTTTCCATTTTAAGTTGGTTGTAATGGCCCCGTATACCCCAAAGAATATCCTCGTCACTGGGGCAGCTGGATTTATTGCATCTCATGTTGCCAACCGGCTCATCCGGAACTACCCTGCCTACAAAATTGTTGTTCTTGACAAACTTGATTACTGCTCTAATTCTAAGAACCTCATTCCTTCAAAATCATCTCCCAACTTCAAGTTTGTGAAGGGGGATATTGCAAGTGCCGACCTTGTCAACTACCTTCTTATCACTGAGTCCATAGACACAATAATGCACTTTGCTGCTCAGACCCATGTTGATAACTCGTTTGGTAATAGCTTTGAGTTCACTAAGAACAACATATATGGTACTCATGTTCTGTTAGAAGCCTGCAAGGTCACTGGTCAGATCAGAAGGTTCATTCATGTGAGCACAGATGAGGTCTATGGGGAGACAGATGAGGATGCCCTTGTTGGAAACCATGAGGCTTCTCAACTTCTCCCCACAAATCCATACTCCGCCACAAAAGCTGGTGCGGAAATGCTGGTCATGGCATATGGTAGGTCGTATGGGTTGCCTGTGATCACAACTCGAGGAAATAATGTTTATGGGCCCAATCAGTTTCCTGAGAAGCTAATTCCAAAGTTCATCCTCTTAGCTATGCAAGGCAAGCCTCTTCCAATTCACGGAGATGGTTCAAATGTGAGGAGTTATTTATACTGCGAAGATGTTGCAGAGGCTTTCGAGGTTATACTTCACAAAGGAGAGGTTGGTCATGTTTACAATATTGGGACTACCAGAGAAAGGAGAGTTATTGATGTAGCCAAAGATATATGCAGACTTTTCTCAATGGACCCGGATTCTTGTATAAAGTTTGTGGAGAACAGACCATTTAATGACCAGAGATACTTTCTGGATGATCAAAAGTTGAAGAACTTAGGTTGGTCTGAGAGGACCCCTTGGGAAGAGGGGCTGAAGAAAACCATAGAGTGGTATACCAATAATCCTGATTGGTGGGGTGATGTCAGCGGGGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCAGGCGGGATGGAGAAACATTTTGATGGTTCTGAAGAAGATAAGCCTGCATCCTTTGCCTCCACTAATACTCGGATGGTGGTTCCATCATCTAAGAACACAAGCACTCAGCAGAAACATGCTTATAAGTTCTTGATCTATGGTAGAACAGGGTGGATTGGGGGTCTGTTAGGGAAACTCTGTGAAAAACAAGAGATTCCATTTGAATATGGGAAAGGGCGCATAGAGGATCGTGCATCACTTATGACAGATATCCAAACTGTGAAGCCTACACATGTTTTCAATGCTGCTGGAGTGACTGGCAGACCCAATGTTGACTGGTGTGAATCTCATAAAACAGAAACCATTCGTACCAACGTAGCTGGTACTTTAACACTGGCCGATGTTTGCAGAGAACAGGGGCTCTTGATGGTAAATTATGCCACTGGGTGTATATTTGAGTATGATGCGGCACATCCGGAGGGTTCTGGCATTGGTTTTAAGGAGGAAGACAAACCCAACTTCACTGGTTCTTTCTATTCCAAAACTAAGGCTATGGTTGAAGAGCTCTTGAAAGAATATGACAATGTGTGCACTCTCAGGGTTCGCATGCCAATTTCATCTGATCTGAGTAACCCACGCAACTTCATTACAAAGATCACTCGTTACAACAAAGTGGTTAACATTCCAAACAGCATGACTATCTTGGATGAACTTTTGCCTATTTCAATTGAAATGGCAAAACGAAACCTGCGTGGCATCTGGAACTTCACGAATCCTGGGGCAGTGAGCCACAATGAGATCCTTGAGATGTACAGGGATTACATTGATCCCAATTTCAAGTGGGCTAACTTCACACTTGAAGAGCAAGCCAAGGTGATAATTGCTCCAAGAAGCAACAATGAGATGGATGCATCCAAGTTGAAGAAAGAGTTCCCGGAGTTGCTTCCCATCAAGGAATCACTGCTCAAATACGTCTTTGAACCAAACAGGAAAACCCATACAAAATAA 2100 0.4319 MTSNLYYTQESMDQTILSVDLFHFKLVVMAPYTPKNILVTGAAGFIASHVANRLIRNYPAYKIVVLDKLDYCSNSKNLIPSKSSPNFKFVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTTRERRVIDVAKDICRLFSMDPDSCIKFVENRPFNDQRYFLDDQKLKNLGWSERTPWEEGLKKTIEWYTNNPDWWGDVSGALLPHPRMLMMPGGMEKHFDGSEEDKPASFASTNTRMVVPSSKNTSTQQKHAYKFLIYGRTGWIGGLLGKLCEKQEIPFEYGKGRIEDRASLMTDIQTVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREQGLLMVNYATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITKITRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFKWANFTLEEQAKVIIAPRSNNEMDASKLKKEFPELLPIKESLLKYVFEPNRKTHTK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0757 699 Pfam GDP-mannose 4,6 dehydratase 38 343 IPR016040 -
Mibi01g0757 699 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 360 IPR036291 -
Mibi01g0757 699 CDD dTDP_GD_SDR_e 35 352 IPR005888 GO:0008460|GO:0009225
Mibi01g0757 699 FunFam UDP-glucose 4,6-dehydratase 37 237 - -
Mibi01g0757 699 Gene3D - 228 350 - -
Mibi01g0757 699 Gene3D - 401 699 - -
Mibi01g0757 699 CDD dTDP_HR_like_SDR_e 413 685 - -
Mibi01g0757 699 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 408 689 IPR036291 -
Mibi01g0757 699 Gene3D - 37 341 - -
Mibi01g0757 699 Pfam RmlD substrate binding domain 413 585 IPR029903 -
Mibi01g0757 699 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 31 366 - -
Mibi01g0757 699 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 403 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0757 Mibi-ChrMibi01 7318641 7322574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0757 36 347 Miscellaneous Gene Families AT4G00110 27.083 2.85e-20 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0757 01 7318641 7322574 Mibi01g0757 01 7318641 7322574 ECH