Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0704 ATGATTCTTCCCACCCGTTTCACCCTTTTCCTTTTAATCCTACTCATCTGCGGTCACTCTCATGGCCGCCCCGTCATCCGCCTTCCATCATCCTCTGATCTCCTCTCCGATGGGGTCTCTGATGATTCCAATCAGGGCAAGGACTTGCTGCTACCCAGGGCGATTCAGTTTCTGACGGAGTCCACCTGTGAGCAGACGTATGGGTTCTTACCCTGCACCACCACTGTGCTTGGCAACTTGTTCCTCATCATCATCTACGGCTTTCTCATGTACAAGGCTGCTACTTACTTGTCCGGTGGCAGTGAGCTCTTGCTTGAGATCTTAGGCCCTGGTATTGTTGGTGGCTTGTTCCTTCCCATACTTGGTGCCCTTCCTGATGCCATGCTCATTCTCGTATCCGGGCTTTCTGGTAGTAAAGAAACTGCTCAAAGTCAGGTCTATGTTGGAATGGGCTTGCTAGCTGGGTCGACAGTTCTGCTTCTGACTATTATATGGGGAACCTGCGTAATTGTTGGGAAGTGCGATCTTGTGGATTCAAAAGCAATAGATTCACAAGACACGAGGGGTTTTAGCTTAACTGGTTCTGGTGTCAGTACAGATATTTGGACAAGTTATGCAGCAATGATTATGGCCATATCTGTCCTTCCATTTTTGATTGTTCAGTTACCACAAATTCTTAATTCAACTTCAGGAAGGCATCTGGCTGTTTTGATTGCTCTTATTGTCTCTGTGTCTTTGTTGATTGCTTATTGCGTTTACCAGATTTTCCAGCCTTGGATACAGAAGAGAAAACTTGATTATGTGAAGCATAAGCATGTTATTTTAGGTCTTTTGAGACACTTGAAGCAGCGTTCATTGGGAAGGTTACTGAGAGATGATGGTGAACCTGATAAAGATATTATAAGAAAGTTATTTGATAGAATTGACGAGAACAATGATGGACGCCTTTCTTATGGTGAACTAAAAGCACTAATTATTGGAATTGAATTTGAGGAGATTGACCTGGATCATGATGATGCTGTGAAAAGAATAATGGAGGATTTTGACACTTCTCATGATTCACTTCTTGATGTAAATGAATTTGTAAATGGTATATGTAGATGGCTTCGAAGGGCTTCACGTTCACGGGCTGCTTCTGGGGATGCTGGTCCACGGACGATAAAGTTCTTGAGCGATTTTCACCAAGAAACCCAAAGGGAACGTGATCTGTTGCATGTGGGGAATCATAGTGATACAGTTGAAGAGGGTGTAGCTGATACTAAATGGAATGTTATCAAAGCAGTGCTGTTACTGCTTCTTGGGACTATCATAGCTGCTGTATTTGCTGATCCTTTGGTTGATGCAGTTGATAACTTTTCTGATGCCACAAACATTCCGGCTTTCTTCATCTCCTTCATTGCACTGCCTTTGGCTACAAATTCCAGTGAAGCTGTGTCAGCAATCATTTTTGCTAGTCGTGATAAGAGGGAAACAGCCTCATTAACCTTTTCTGAGCTATATGGGGCAGTGACAATGAACAATGTGCTGTGCCTTTCGGTGTTCTTGGCCCTTGTTTATGCAAGGGGATTGACATGGGACTTCTCTTCAGAAGTGCTGGTTATTGTCATAGTTTGCATTGTCATGGGTCTCTTTGCCAGCTTCCGCACCAGCTTCCCTCTTTGGACAGCTATAATGGCTATCCTACTCTACCCCTTTTCCCTGGCTTTGGTGTATGTTCTTGATTATGTCTTTGGTTGGTCGTAG 1743 0.4395 MILPTRFTLFLLILLICGHSHGRPVIRLPSSSDLLSDGVSDDSNQGKDLLLPRAIQFLTESTCEQTYGFLPCTTTVLGNLFLIIIYGFLMYKAATYLSGGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQSQVYVGMGLLAGSTVLLLTIIWGTCVIVGKCDLVDSKAIDSQDTRGFSLTGSGVSTDIWTSYAAMIMAISVLPFLIVQLPQILNSTSGRHLAVLIALIVSVSLLIAYCVYQIFQPWIQKRKLDYVKHKHVILGLLRHLKQRSLGRLLRDDGEPDKDIIRKLFDRIDENNDGRLSYGELKALIIGIEFEEIDLDHDDAVKRIMEDFDTSHDSLLDVNEFVNGICRWLRRASRSRAASGDAGPRTIKFLSDFHQETQRERDLLHVGNHSDTVEEGVADTKWNVIKAVLLLLLGTIIAAVFADPLVDAVDNFSDATNIPAFFISFIALPLATNSSEAVSAIIFASRDKRETASLTFSELYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVIVIVCIVMGLFASFRTSFPLWTAIMAILLYPFSLALVYVLDYVFGWS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0704 580 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 62 572 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mibi01g0704 580 Pfam Sodium/calcium exchanger protein 81 257 IPR004837 GO:0016020|GO:0055085
Mibi01g0704 580 Pfam Sodium/calcium exchanger protein 427 571 IPR004837 GO:0016020|GO:0055085
Mibi01g0704 580 Gene3D - 246 379 - -
Mibi01g0704 580 ProSitePatterns EF-hand calcium-binding domain. 309 321 IPR018247 -
Mibi01g0704 580 SUPERFAMILY EF-hand 296 374 IPR011992 -
Mibi01g0704 580 Pfam EF-hand domain pair 301 363 IPR002048 GO:0005509
Mibi01g0704 580 SMART efh_1 340 368 IPR002048 GO:0005509
Mibi01g0704 580 SMART efh_1 300 328 IPR002048 GO:0005509
Mibi01g0704 580 CDD EFh 301 365 IPR002048 GO:0005509
Mibi01g0704 580 FunFam Sodium/calcium exchanger NCL2 416 573 - -
Mibi01g0704 580 FunFam Sodium/calcium exchanger family protein / calcium-binding EF hand family protein 273 395 - -
Mibi01g0704 580 ProSiteProfiles EF-hand calcium-binding domain profile. 336 371 IPR002048 GO:0005509
Mibi01g0704 580 ProSiteProfiles EF-hand calcium-binding domain profile. 296 331 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0704 Mibi-ChrMibi01 6693825 6698110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0704 20 580 EF-hand Containing Proteins AT1G53210 68.254 0.0 750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0704 01 6693825 6698110 Mibi01g0704 01 6693825 6698110 ECH