Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0702 ATGAGAAACATCTCAAAACCAGCATGCTTCATCTTCATCTTTATTCTTCTTCTAGCAGCAGTTCTTGAGGTTGAAGGTCGTTTTCTGCAAAACGGTGCTTCTTCTTCTGCTGCTGCTGCTGCATTGTTGACTTCAGATGGAGTTGACGAGGATGATGACGGGGTTCAACCCCAGAAGAACTCTCACTTGTTTCTCAGAGGGAATACCGTAAAAACTGAACCTGCTGAAGAAGTCTGTGAGCAAATGTACGGCTTCTTGCCCTGTTCAACTAGCTTGTTTGGTCACCTCTTTCTGATTCTAGTTTATGAGTTCTTGCTGTTCCATGGAGAATCATTCTTGGCTTCTGGGGGTGAGCAGATCTTCAAGATTCTTGGCCCTGGCCTTTTCGGCGCAAGTGCCTTTGATCTTCTTGGTGCCCTTCCTGAGTCTTTGATTCTTCTTGTTACTGGGCTTTCCAGAGAGACCCAAGAGAGTGCACAAGAGTATGCTTCCACTGGAGTTGGCATATTGGCTGGATCATCCATCTTGCTCCTCACAATAGTATGGGGAACCTGTGTCATCACTGGCAGGCAAAACTTGAAAACTGACTCAAGGAATAAATCCTCTCATAATTCAAATCCATTAAGTTCAACTCCTAAAGAATTATTATCTGGGTTTGGGATTACTATGGATAAAGAGACAAAGGAAATGGCAAGAATCATGGTTCTCTCAGTTATACCACTCATAATTATGCAGATTCCCAGTGTGTTTGGATTCTCTTCAGTGCTTCGATCTGTGACCTTGATGGTTGCTCTAATTGTTACTGTCATTTTTGTCTTCTCATACTTCATTTATCAGATATTTAAACCTCATATAGAGAAAACAAGGCTAGAATACATAAAGCATCATGATTTAATATTGAGAATTTTCGAGCATGTTGAAAAGCAAACCCTTCAAAAGATCCTCACTGAGGATGGCTCTCCTAATGTGGCAGCCATTAATGGGCTATACAATGAAATTAGTCAACACGGAGGAGACAGGGATTTATCAGCTTCTGAAGTGAAAGAGCTGCTGCTTAAGAACAAACTAACTGGGACAAACATCTCAGAGGAACAAGTTGAAGGCATGTTAAGAGTGTTTGATCGAAATAATGACCAAATTATAACCAAGGAGGAGTTTGTCACTGGATTAACACAATGGATTGAGCAAACCAAGCATGCTTTGGATAAACAATACATACCAAGAAAATCACTCCAGAACATTTATCAGCCATGGATGGAGCACACAAGAAAAGAGCGTCAGATGAAGGGACATCTTGTATCTGAAATCTTAAGGCATGCCCAGAATGATATGGTTGGGGAGCTTCTCCATGATGATGGAACGGCGGATGAGTCTGCTATTAGAAGGTTGTTTGAGGAAGTTGATAGCAATGGAGATAACTGTGTTTCTCAATCCGAGGTAAGGAAACTAGTGACCAGCCTCCACTTTGGTAAGGCAGTGGATGAGGAGGAAGCGGTCAAGAAAATAATTCAAGATTTTGATATAAACAGTGACAATATGATTAGTGAGGAGGAATTTGTGGATGGATTCACAAAATGGGTGCTTTCATCTCCCACACAAGCTCCACACTCAAAAACTCTACCTCATGAAGAAGAAACTCATCAAACATGGGAAAATGTTGAGAAGGTTGTGGAAGAGAAGCATCAGCACAAAGGACTGTATGGATGGATCATGGCTATAATCAATGTGGTGCTTGGAATTACTATATTATCTATTCTTGCAGAGCCATTAATAGACAGTGTCCAGGAATTTTCTACAAAAGCTGGAATACCATCTTTCTTTGCCTCATTCATATTAGTCCCTCTGGCCACAAATTTTAGAGAAGCAACTTCAGCCATCAAAGAAGCTAGCCACAAGAAGAGAAGTAACACTTCTCACACAATCTATGAGATTTATGGAGCAGTATTTATGAACAACATTCTTGGATTTGCGGCAATTGCAACTCTGATATATGTGAGAGAAATAGCTTGGGAATTCTCAGCTGAAGTGTTGGTGGTGGCAATAGTCTGTGCTGTAATGGGCCTGTCTGCAAGTTTTCGGCCCAATTTTCCTTTGTGGACATCCTTCGGAGCTTACCTTTTATATTTCTTGTCTTTAATTCTGGTCTATGTTCTTAATGATGTTCTTCATTATGAGTGA 2178 0.4086 MRNISKPACFIFIFILLLAAVLEVEGRFLQNGASSSAAAAALLTSDGVDEDDDGVQPQKNSHLFLRGNTVKTEPAEEVCEQMYGFLPCSTSLFGHLFLILVYEFLLFHGESFLASGGEQIFKILGPGLFGASAFDLLGALPESLILLVTGLSRETQESAQEYASTGVGILAGSSILLLTIVWGTCVITGRQNLKTDSRNKSSHNSNPLSSTPKELLSGFGITMDKETKEMARIMVLSVIPLIIMQIPSVFGFSSVLRSVTLMVALIVTVIFVFSYFIYQIFKPHIEKTRLEYIKHHDLILRIFEHVEKQTLQKILTEDGSPNVAAINGLYNEISQHGGDRDLSASEVKELLLKNKLTGTNISEEQVEGMLRVFDRNNDQIITKEEFVTGLTQWIEQTKHALDKQYIPRKSLQNIYQPWMEHTRKERQMKGHLVSEILRHAQNDMVGELLHDDGTADESAIRRLFEEVDSNGDNCVSQSEVRKLVTSLHFGKAVDEEEAVKKIIQDFDINSDNMISEEEFVDGFTKWVLSSPTQAPHSKTLPHEEETHQTWENVEKVVEEKHQHKGLYGWIMAIINVVLGITILSILAEPLIDSVQEFSTKAGIPSFFASFILVPLATNFREATSAIKEASHKKRSNTSHTIYEIYGAVFMNNILGFAAIATLIYVREIAWEFSAEVLVVAIVCAVMGLSASFRPNFPLWTSFGAYLLYFLSLILVYVLNDVLHYE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0702 725 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Mibi01g0702 725 Pfam Sodium/calcium exchanger protein 575 716 IPR004837 GO:0016020|GO:0055085
Mibi01g0702 725 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 82 717 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mibi01g0702 725 SMART efh_1 365 393 IPR002048 GO:0005509
Mibi01g0702 725 SMART efh_1 498 526 IPR002048 GO:0005509
Mibi01g0702 725 SMART efh_1 459 487 IPR002048 GO:0005509
Mibi01g0702 725 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Mibi01g0702 725 CDD EFh 460 524 IPR002048 GO:0005509
Mibi01g0702 725 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Mibi01g0702 725 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
Mibi01g0702 725 Gene3D - 399 537 - -
Mibi01g0702 725 Pfam EF-hand domain pair 458 521 IPR002048 GO:0005509
Mibi01g0702 725 Gene3D - 320 398 - -
Mibi01g0702 725 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Mibi01g0702 725 SUPERFAMILY EF-hand 337 529 IPR011992 -
Mibi01g0702 725 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0702 Mibi-ChrMibi01 6681554 6685960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0702 413 719 EF-hand Containing Proteins AT1G53210 41.486 2.50e-65 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0702 01 6681554 6685960 Mibi01g0702 01 6681554 6685960 ECH