Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0641 ATGAGCAAAGCTAGAGGGGACGAAGCTGACGAACAAGAAGAGCGCTTCTACGAGTCTAACGACCGTCTAGTTTCGTCCTCTTGCTCTTGCTCTACTTCCAACTCCGATGACGACGACGATAACAACGGCAATGATTTCAGTTCCGTACCAAAATTCCCTTCGGCCATGTGCGAGTACGATGTTTGGATCTCTGAACCGTCGTCGGTTTCTGAACGCCGGAGACGTCTTCTTCGCGAGATGGGTCTCGCCGGTGACACGTCATTGTCCCGCGGGAAGGCTGCTTCTGCCGGTGATCTTAGAGAAATGGCCAATGGAGAGTTTGGCCGATCGGTGTTTGCCGATCAACAACAGGGTGAAACTTCTGGTTTCACCGCCGGCATAAGCCGATCGAAATCAGACGGTGGCGCCGATCTCGGTGATTCGCAAGTGTGTACTGGTCGGTCTCGTCGTCATCATAATAAGTCTGCTTCTTCTTGTTCTTCAATTCTTTATGCTCACTCGGTTGCCTCTGAGAACGGCTCATTTGTAAATAGTCGTAATCAAGTTGTTAAGTCGAGGTGTGGCAATGGCAATGGATCCCCGATTGTTAATGCTGTTACCCCGAATAAGCCGCCTTCAGGGAAAAATTGCAGAAGGTTGGGTGAAATCCGAAGTGGGTCATCGAACTTGAGCGTGGATTTCGGCCAGTTTTCGGTTGAGCCTGTTTTGGAGAATGCTGGTGGTGGGAAGGTGGGGGAGGGTGTGAACTGTGGTGAACTTGACAGGGATGATGAACAAGTGTGTACCATAAGAGATCTTGATAATGGGAAGGAATTTGTTGTCAAGGAGGTTAAGGAAGATGGAACGTGGAACAAATTAAAGGAAGTGGGAACTGGAAGGCATTTGACCATGGAGGAGTTTGAGATGACAGTGGGACACTCACCAATTGTTCAAGAATTGATGAGACGGCAGAATTTCGAGGCGGGTCACAAGGACAATATGGATTCAAATGCAAATATAACTGCAAATGGCGGTAATGGAGGTGGTACCAAGGTGAAGAAGAAAGGGGGTTGGTTTAAGAGTATAAAGAGTGTTGCCAGCACCATGACGGGTTATAAGGACAGACGCAGTAGTGATGAGAGGGATTCCTCATCAGAAAAGGGTGGGCGGAGGTCAAGTTCTGCTACAGATGAAAGCCAAGATGCTTATTTACATGGACCTGAAAGGGTGCGGGTTAGGCAGTATGGAAAGTCATGTAAAGAGGTTTCTGCACTCTATAAGAGCCAGGAAGTACAGGCTCATAATGGATCTATATGGAGCATTAAGTTTAGTTTAGATGGGAAATATCTTGCTAGTGCAGGTGAGGATCGAGTAATTCATGTGTGGCAAGTTGTGGAGTCAGAGAGGAAGGTGGAGCTGCTAATGGAGAAGCCAGGCCATGGGAATATGAATACGTTATTGGTTATGAATGGATACACCGAACCAACCTTGCTATCTCCTAACCATCCAGACACGAAGAGAAGGGGGAGGTCATCCATCAGCAGAAAATCATTGAGCTTGGACCAGTTAGTTGTGCCAGAAACTATGTTTGCATTAACTGAAAAACCTATTTGCACATTCGAAGGTCATCATGATGATGTTCTTGATCTATCTTGGTCCAAATCTCAGCACTTGCTTTCCTCTTCAATGGATAAAACGGTGCGGCTGTGGCATTTATCGAGCAAGTCTTGTTTGAAAGTTTTTAAACACAGTGATTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATCAGTGGATCCTTGGATTCTAAGGTTCGCATATGGAGTATCCCTGATCATAAAGTTGTTGACTGGATTGATTTGCATGAGATGATCACTGCTGCTTGCTACACACCTGATGGTCAGGGTGCACTGGTAGGTTCATACAAGGGCAGCTGCCATTTGTATAATACATCTGAAAATAAGTTGCAACAGAAGAGTGAGATTATGCTGCAGAACAAGAAAAAGAAGTCAAATCTCAAGAAAATTACTGGTTTCCAGTTTGCTCCAGGAAGTTTGTCAGAATTACTCATAACATCTGCTGACTCTCGAATTCGATTGGTTGATGGTGTTGATCTGGTCCATAAGTTCAAAGGATTTCGCAACACAAATAGCCAAATTTTAGCCTCGTTTACAGCAAATGGAAAATATATTGTTTCAGCAAGTGAGGATTCTCATGTGTATGTGTGGAAAAATGAAGCTAATTGCAGGCCCAACAGAACCAAAGGTGTCACTATCACTCAGTCATATGAACATTTTCATTGTAGAGATGTGTCGGCGGCCATTCCTTGGCCTGGTATGGGTGATGCATGGGAAATGCAAGATACTTCATCTGGAGAACAAACTGGGGCTGATAGTATCTCCGACGAGGTCTCATCAGCGAATCATCCCCCAACCCCAGTAGATGAATGTTTTGGTAATGAGGCATTAAGGGCCAACAATGGTTCACTTCAGGGAACTATAGCTAATGCCACGAACAGTTACTTTTTTGACAGAATATCTGCGACATGGCCGGAGGAAAAACTAGTTCTTGCTGCTAGGAGACGAAGCCCTCGAGTTAGTGTGGATATATCAGACGGGGTTCACCAAAACATGTCAGCCTGGGGCCTGGTTATGGTGACTGCTGGCCTTCGAGGGGAAATCCGAGCTTTTCAGAATTTTGGATTGCCACTGCGGACGTAA 2712 0.4546 MSKARGDEADEQEERFYESNDRLVSSSCSCSTSNSDDDDDNNGNDFSSVPKFPSAMCEYDVWISEPSSVSERRRRLLREMGLAGDTSLSRGKAASAGDLREMANGEFGRSVFADQQQGETSGFTAGISRSKSDGGADLGDSQVCTGRSRRHHNKSASSCSSILYAHSVASENGSFVNSRNQVVKSRCGNGNGSPIVNAVTPNKPPSGKNCRRLGEIRSGSSNLSVDFGQFSVEPVLENAGGGKVGEGVNCGELDRDDEQVCTIRDLDNGKEFVVKEVKEDGTWNKLKEVGTGRHLTMEEFEMTVGHSPIVQELMRRQNFEAGHKDNMDSNANITANGGNGGGTKVKKKGGWFKSIKSVASTMTGYKDRRSSDERDSSSEKGGRRSSSATDESQDAYLHGPERVRVRQYGKSCKEVSALYKSQEVQAHNGSIWSIKFSLDGKYLASAGEDRVIHVWQVVESERKVELLMEKPGHGNMNTLLVMNGYTEPTLLSPNHPDTKRRGRSSISRKSLSLDQLVVPETMFALTEKPICTFEGHHDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFKHSDYVTCIQFNPVDDRYFISGSLDSKVRIWSIPDHKVVDWIDLHEMITAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSEIMLQNKKKKSNLKKITGFQFAPGSLSELLITSADSRIRLVDGVDLVHKFKGFRNTNSQILASFTANGKYIVSASEDSHVYVWKNEANCRPNRTKGVTITQSYEHFHCRDVSAAIPWPGMGDAWEMQDTSSGEQTGADSISDEVSSANHPPTPVDECFGNEALRANNGSLQGTIANATNSYFFDRISATWPEEKLVLAARRRSPRVSVDISDGVHQNMSAWGLVMVTAGLRGEIRAFQNFGLPLRT 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 424 457 - -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 781 810 - -
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 533 567 - -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 363 402 - -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 1 50 - -
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats profile. 424 465 IPR001680 GO:0005515
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats profile. 720 741 IPR001680 GO:0005515
Mibi01g0641 903 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g0641 903 Gene3D - 509 765 IPR015943 GO:0005515
Mibi01g0641 903 MobiDBLite consensus disorder prediction 21 37 - -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 113 156 - -
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats profile. 573 607 IPR001680 GO:0005515
Mibi01g0641 903 MobiDBLite consensus disorder prediction 784 805 - -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 366 387 - -
Mibi01g0641 903 FunFam WD repeat-containing protein 44 514 780 - -
Mibi01g0641 903 PRINTS G protein beta WD-40 repeat signature 443 457 IPR020472 -
Mibi01g0641 903 PRINTS G protein beta WD-40 repeat signature 593 607 IPR020472 -
Mibi01g0641 903 PRINTS G protein beta WD-40 repeat signature 551 565 IPR020472 -
Mibi01g0641 903 MobiDBLite consensus disorder prediction 324 339 - -
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 573 607 - -
Mibi01g0641 903 Pfam WD domain, G-beta repeat 423 455 IPR001680 GO:0005515
Mibi01g0641 903 Pfam WD domain, G-beta repeat 720 741 IPR001680 GO:0005515
Mibi01g0641 903 Pfam WD domain, G-beta repeat 528 563 IPR001680 GO:0005515
Mibi01g0641 903 Pfam WD domain, G-beta repeat 569 606 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 609 647 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 663 699 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 417 456 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 567 606 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 526 564 IPR001680 GO:0005515
Mibi01g0641 903 SMART WD40_4 700 741 IPR001680 GO:0005515
Mibi01g0641 903 PANTHER WD REPEAT DOMAIN 44 7 900 IPR040324 -
Mibi01g0641 903 SUPERFAMILY WD40 repeat-like 420 743 IPR036322 GO:0005515
Mibi01g0641 903 MobiDBLite consensus disorder prediction 113 128 - -
Mibi01g0641 903 Gene3D - 404 486 IPR015943 GO:0005515
Mibi01g0641 903 ProSiteProfiles Trp-Asp (WD) repeats profile. 533 573 IPR001680 GO:0005515
Mibi01g0641 903 MobiDBLite consensus disorder prediction 323 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0641 Mibi-ChrMibi01 6161938 6167054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0641 419 620 Miscellaneous Gene Families AT5G08390 21.596 1.16e-07 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0641 01 6161938 6167054 Mibi01g0641 01 6161938 6167054 ECH