Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0640 ATGGCTCTCCAGGCTGCTGCTTCCCTGGTCCCTGCTTCTTTCTCCATTCCAAAAGAGGGAAAATCTAGCGTTTCTCTTAAGGACTCGGCTTTTTTTGGGCTTTCATTATCAGATAATCTCAGAGCTGACTTCAGCTCTTCTGCATTGAGATGCAAGCAAAAAGTAGGAACTGTGAGGGCCCAGACAGCAGCTACTACGACTCCAGCAGTTAACAAGGCTGCACCTGAAGGCAAGAAAACACTGAGGAAGGGAAGTGTTGTAATAACTGGGGCCTCCTCTGGATTGGGTCTGGCTACTGCTAAGGCTTTGGCTGAAACAGGAAAATGGGATGTAATTATGGCCTGCAGGGACTTCCTTAAAGCCGAAAGAGCCGCCAAGTCAGCTGGCATGTCTAAGGAACACTACTCCATCATGCACCTAGACCTCGCCTCTTTTGACAGTGTCCGTCAATTTGTTGACAACTTCAAGCGATTGGGCAAACCACTCGATGTTCTGGTCTGCAATGCTGCAGTGTACTTGCCAACCGCTAAGGAACCTACATTCACTGCTGAAGGCTTTGAGCTCAGTGTTGGGACAAACCATTTGGGGCATTTTCTCCTTTCACGCTTGTTGCTTGAGGACTTGCAGAAATCTGATTATCCTTCAAAGCGTTTGATCATTGTGGGCTCAATCACAGGAAACACAAACACACTGGCTGGTAACGTGCCTCCCAAGGCAAACCTTGGTGACATGAGGGGACTTGCAGGTGGATTGAATGGACTAAACAGTTCAGCTATGATCGATGGTGGAGACTTTGATGGCGCAAAGGCATACAAGGACAGCAAAGTCTGCAATATGCTCACCATGCAAGAATTCCACCGGAGATACCATGAGGAGACCGGGATCACATTTGCTTCCCTTTACCCAGGTTGCATTGCCACAACCGGCTTGTTCAGAGAACACATTCCATTGTTCAGAGCTTTGTTTCCTCCATTCCAGAAGTACATAACCAAGGGCTATGTCTCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGGTTGTGAGTGATCCAAGCCTCACAAAATCTGGTGTTTACTGGAGCTGGAATAAGGCCTCTGCTTCATTTGAAAACCAGTTGTCTCAAGAGGCTAGTGATCCAGAGAAGGCTCGCAAGGTGTGGGACATCAGTGAGAAACTTGTTGGATTGGCGTAA 1191 0.4777 MALQAAASLVPASFSIPKEGKSSVSLKDSAFFGLSLSDNLRADFSSSALRCKQKVGTVRAQTAATTTPAVNKAAPEGKKTLRKGSVVITGASSGLGLATAKALAETGKWDVIMACRDFLKAERAAKSAGMSKEHYSIMHLDLASFDSVRQFVDNFKRLGKPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLQKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRALFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDPEKARKVWDISEKLVGLA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0640 396 CDD LPOR_like_SDR_c_like 83 395 - -
Mibi01g0640 396 Pfam short chain dehydrogenase 86 228 IPR002347 -
Mibi01g0640 396 Gene3D - 72 396 - -
Mibi01g0640 396 PRINTS Glucose/ribitol dehydrogenase family signature 293 310 IPR002347 -
Mibi01g0640 396 PRINTS Glucose/ribitol dehydrogenase family signature 160 171 IPR002347 -
Mibi01g0640 396 PRINTS Glucose/ribitol dehydrogenase family signature 85 102 IPR002347 -
Mibi01g0640 396 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 1 396 IPR005979 GO:0016630
Mibi01g0640 396 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 363 IPR036291 -
Mibi01g0640 396 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 82 396 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0640 Mibi-ChrMibi01 6157938 6159899 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0640 01 6157938 6159899 Mibi01g0640 01 6157938 6159899 ECH