Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0638 ATGGATCGGCTTCTAAAATCTGCAAGAGCATCGGGTTCCCTCAACCTCTCAAATCGCTCACTCAGGGAAGTTCCCAATGAGGTGTATCAGAATCTGGAGGGGGGTGGTGGGGATGATAGGTGGTGGGAGTCCGTGGATCTTCAAAAGCTCATCTTGGCTCATAATGAAATTGAATCATTAAAGGAGGATCTTAGAAACTTACTTTCGCTAACTGTGTTGAACGTTAGCCACAACAAACTTTCTGAGCTTCCAGCAGCAATTGGAGAGCTATCTCAACTAAAGTTGCTGGATGTTTCCTTCAATTTGATAAATAAAATACCCGAGGAAATTGGATCCGCAGCATCACTTGTTAAGCTTGATTTCGCAAACAATCAACTGAAGGAGCTTCCGAGCTCACTTGGCCAATGTATAGCATTGTCAGAATTGAAGGGATCAAACAACCTCATTGCCAGCTTACCAGGTGATTTAGCAAATTGTTCAAAATTGATAAAGCTTGACATGGAGGGAAACAAACTAACTACGATTCCTGAAAACCTCATTTCTTCATGGACCATGCTTACTGAATTGAATGCATCAAAAAACTTGCTAAATGGCATACCAGTAAGCATTGGAGGTCTTTCTCGGCTAATTCGTCTTGACCTCCATCAGAACAAAATCTCATCAGTCCCTTCATCAATAAATGGTTGCCATTCACTTGCAGAGTTTTATTTGGGGAATAACAGCCTTTCTGCTGTACCAGCAGAGATAGGGACACTCTCACGACTAGGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTATCCAGTTGAGGCATGCAAGTTGGGTCTTTTAGTCTTAGATCTTTCAAACAATTCATTGAGTGGCTTACCTGCTGAATTGGGCAAGATGACCACCTTGAGGAAACTTTTGCTTGTGGGCAATCCTTTGCGGACGCTTCGAAGCTCATTAGTCTCTGGACCTACGCCAGCACTGCTGAAGTTTCTTCGAAGTAGACTTTCTGAGGGTGAAGAGTCTACATCTACAATCAGTACAAAAGAGGATGTCATTGCAAAGGCTACTAGATTGTCTATCACTTCAAAGGAACTTTCTTTGGAAGGGCTGGGGTTGAGTGCTGTTCCATCAGAAATATGGGAATCAGGGGAGGTCATAAAAGTTGATCTTTCAAGAAATTCCATTGAGGAGTTGCCAGCGGAGCTCTCCTCTTGTGTTTCCCTCCAGACACTAATTCTATCTAAGAATAAAATTCAAGATTGGCCTGGTTCAATTCTTAAATATCTTTCAAGTCTGACTTGTTTGAAGCTGGACAGCAATCCCCTGAGACAGATTCCTTCAGATGGTTTCCAAACTGTGCCTATGCTTCAGGTTTTTGATCTAAGTGGTAACTCAGCCGCACTGCCAAATGGTCCTGTATTCTCTAGTATGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGTCCCTTCAGATGTATTGGTGCTATCTCAACTGCGAATCCTTGACTTAAGTCAAAATTCCCTTCAATCAGTCCCATCGGGGTTCAAAATTCTCACTTCTCTCACGGAGCTTGACCTATCTAATAATAACATCTCACTCCTTCCTCCTGAACTGGGTTTGCTGGAATCAAGCCTTCAGGTATTGAGACTTGATGGAAATCCTCTCAGAAGCATTCGGAGGACTATCTTGGATAAAGGAACGAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCAATAG 1755 0.4262 MDRLLKSARASGSLNLSNRSLREVPNEVYQNLEGGGGDDRWWESVDLQKLILAHNEIESLKEDLRNLLSLTVLNVSHNKLSELPAAIGELSQLKLLDVSFNLINKIPEEIGSAASLVKLDFANNQLKELPSSLGQCIALSELKGSNNLIASLPGDLANCSKLIKLDMEGNKLTTIPENLISSWTMLTELNASKNLLNGIPVSIGGLSRLIRLDLHQNKISSVPSSINGCHSLAEFYLGNNSLSAVPAEIGTLSRLGTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPAELGKMTTLRKLLLVGNPLRTLRSSLVSGPTPALLKFLRSRLSEGEESTSTISTKEDVIAKATRLSITSKELSLEGLGLSAVPSEIWESGEVIKVDLSRNSIEELPAELSSCVSLQTLILSKNKIQDWPGSILKYLSSLTCLKLDSNPLRQIPSDGFQTVPMLQVFDLSGNSAALPNGPVFSSMPHLQELYLRRMQLSEVPSDVLVLSQLRILDLSQNSLQSVPSGFKILTSLTELDLSNNNISLLPPELGLLESSLQVLRLDGNPLRSIRRTILDKGTKAVLKYLKDKLPEQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0638 584 Coils Coil 47 70 - -
Mibi01g0638 584 SMART LRR_typ_2 45 66 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 498 520 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 252 275 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 381 403 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 521 544 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 90 113 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 427 450 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 114 136 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 159 182 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 67 88 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 404 426 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 206 229 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 297 320 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 546 568 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 475 496 IPR003591 -
Mibi01g0638 584 SMART LRR_typ_2 276 296 IPR003591 -
Mibi01g0638 584 Gene3D Ribonuclease Inhibitor 329 465 IPR032675 -
Mibi01g0638 584 SUPERFAMILY L domain-like 14 318 - -
Mibi01g0638 584 PRINTS Leucine-rich repeat signature 498 511 - -
Mibi01g0638 584 PRINTS Leucine-rich repeat signature 277 290 - -
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 115 136 IPR001611 GO:0005515
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 405 426 IPR001611 GO:0005515
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
Mibi01g0638 584 Pfam Leucine rich repeat 47 103 IPR001611 GO:0005515
Mibi01g0638 584 Pfam Leucine rich repeat 405 462 IPR001611 GO:0005515
Mibi01g0638 584 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Mibi01g0638 584 Pfam Leucine rich repeat 254 310 IPR001611 GO:0005515
Mibi01g0638 584 Gene3D Ribonuclease Inhibitor 170 272 IPR032675 -
Mibi01g0638 584 Gene3D Ribonuclease Inhibitor 273 328 IPR032675 -
Mibi01g0638 584 Gene3D Ribonuclease Inhibitor 466 580 IPR032675 -
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 500 521 IPR001611 GO:0005515
Mibi01g0638 584 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Mibi01g0638 584 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Mibi01g0638 584 SUPERFAMILY L domain-like 361 563 - -
Mibi01g0638 584 Pfam BspA type Leucine rich repeat region (6 copies) 131 195 IPR026906 -
Mibi01g0638 584 Gene3D Ribonuclease Inhibitor 4 169 IPR032675 -
Mibi01g0638 584 PANTHER - 13 190 - -
Mibi01g0638 584 SMART LRR_bac_2 90 109 - -
Mibi01g0638 584 SMART LRR_bac_2 67 86 - -
Mibi01g0638 584 SMART LRR_bac_2 113 132 - -
Mibi01g0638 584 SMART LRR_bac_2 186 202 - -
Mibi01g0638 584 SMART LRR_bac_2 274 293 - -
Mibi01g0638 584 SMART LRR_bac_2 498 517 - -
Mibi01g0638 584 SMART LRR_bac_2 206 225 - -
Mibi01g0638 584 SMART LRR_bac_2 521 541 - -
Mibi01g0638 584 SMART LRR_bac_2 159 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0638 49 541 Receptor kinase-like Gene Family AT4G08850 29.137 1.93e-32 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0638 01 6145215 6152884 Mibi01g0638 01 6145215 6152884 ECH