Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0561 ATGGATTTGTTTTTCGTCATTTTATTGGCCGCATTCTTCCCCACTGTTTCCCTCTTTCACTTTCCCTTTCCCTTTGGCGCCTCCCAATCTCTCATCTTTCGTCCATTTCCTTCCTCTTCGATTTCTCAGAAATCTTCATCAATGGCAGGTAGAGGAAAAACCTTAGGATCTAGTTCTGCAAAGAAGGCTACTTCTCGTAGCAGCAAAGCCGGCCTTCAATTCCCTGTCGGTCGTATTGCTCGCTTCTTGAAGGCCGGCAAGTATGCCGAGCGCGTTGGTGCCGGAGCTCCCGTTTACTTGGCTGCCGTTCTTGAATATCTCGCCGCTGAGGTTCTTGAGTTGGCTGGAAACGCTGCTAGAGATAACAAGAAGACTCGTATCGTGCCTCGTCACATTCAATTGGCGGTTAGGAACGATGAAGAACTCAGCAAGCTTTTGGGGGATGTGACTATAGCTAATGGTGGTGTTATGCCCAACATTCACAACTTGCTACTTCCTAAGAAGACCGGTACTTCTTCCAAGGGCGCTGCTGGTGACGACGACTCTTAA 549 0.4863 MDLFFVILLAAFFPTVSLFHFPFPFGASQSLIFRPFPSSSISQKSSSMAGRGKTLGSSSAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSSKGAAGDDDS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0561 182 Gene3D Histone, subunit A 48 176 IPR009072 GO:0046982
Mibi01g0561 182 FunFam Histone H2A 48 176 - -
Mibi01g0561 182 Pfam Core histone H2A/H2B/H3/H4 42 137 IPR007125 GO:0003677
Mibi01g0561 182 CDD H2A 56 168 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 Pfam C-terminus of histone H2A 140 174 IPR032454 -
Mibi01g0561 182 SMART h2a4 51 171 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 PRINTS Histone H2A signature 62 84 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 PRINTS Histone H2A signature 148 166 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 PRINTS Histone H2A signature 91 106 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 PRINTS Histone H2A signature 120 134 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 PRINTS Histone H2A signature 106 119 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mibi01g0561 182 ProSitePatterns Histone H2A signature. 70 76 IPR032458 -
Mibi01g0561 182 MobiDBLite consensus disorder prediction 41 66 - -
Mibi01g0561 182 SUPERFAMILY Histone-fold 57 170 IPR009072 GO:0046982
Mibi01g0561 182 PANTHER HISTONE H2A 57 169 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0561 Mibi-ChrMibi01 5247795 5248804 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0561 01 5247795 5248804 Mibi01g0561 01 5247795 5248804 ECH