Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0555 ATGATGAATGATGATCAGAAACCTCAGCAAGCAGGTGTTGTACGGTCCGGTCGGACCAATGGGTTTTTTCCCAGCTCTCTCCGGGCTATCTCCAGCTACCTCAGGGTTGTTTCCTCTGGTGCTTCCAACGTTGCTCGTTCGGCAGCATCAGTTGCATCCTCGATTGTGGATAAAGATGACGATGCCAATTCTGATCAGGCCATCTGGGCTGGTTTTGATAAATTAGAGGCTGAGGAAGGAGTCACCCGTCAAGTTCTACTTCTAGGCTTTCGGTCTGGCTTCCAGGTTTGGGATGTTGAAGATTCACATAATGTACATGATCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCGATTGCATCAAAGAGATCAGCAGAAAAGTTTGCAAACAGCCGCCCTCTGTTAGCTGTATGTGCTGACGGTTTCTTTGCTGGAGGCAGTAATGTTCAGGATGGACTGGCCACCCCTTACAATGGGAGCACTTCCAATTTTCGTGAGCAATTAAATGGAAATTATCTGCCAACGACTGTTCAGTTTTATTCCATGAGATCCCAATCATACGTCCATGCACTAAAATTTAGATCTGTTGTGTATTCTGTAAGGTGCAGTTCTCGAATGGTTGCTGTTTCTCAATCTACTCAGATACACTGTTTTGATGCTGCAACGTTAGAAAGAGAGTATACTATACTAACCAATCCTATAGTTGCAAGTTATCCTGGTTCTGGAGGTCTAGGCTATGGACCACTTGCAGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTCCAGTTACAATATATAATTATGGGCATGTCAATCCTCAAGACTTGACAACTTCAGCAAGCTTTCCTGGTTTTTCTTCAAATGGTAGCTTGGTTGCACACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGAATTGTGTCGCTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTACTCTGAGCTTCTTTCTGATAGCAATAGTTCATCACGATCTGTAAACTCAGGTGGGAAGGGCAATGGAACCATTAATGGACATTCAGCGGATGCTGACAACATTGGAATGGTCATTATAAGGGATATTGTCAGTAAAAATGTAGTCACTCAACTGCGAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCCAGTGGAACCATTCTGGTGACTGCTTCAGTTCAGGGGCATAATATAAATGTATATAAGATAATGCCTTGTCACTCAGAAGCACCTGATGCTGGCCCTTCTAATGTTCATCTCTACAAGTTGCTACGTGGCTATACAAATGCAATAATACAAGATATTACTTTCAGTGATGACAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTAGCCATCTATATGCTATAAATCCTCAGGGAGGAGCTGTGAATATTCAAGCCCTTGATTGTAGTCTTCCAACACAAAATAACGGATTGGGTGGTATTAATAATCAAGGAGCCCTCTATCCACATAGTTCAGTCTTGCAAATGCATAAAAAGCAGAGCCTGTGTGCTACTGGCCCGCCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGCTGGAGGGGCACTGTGAGCGGTGCTGCTGCAGCTGCAGCAGGAAAGATGAATTCCCTGTCTGGGGCCATAGCTTCATCTTTCTGTAGCTGTAAGGGCAGTGGCATGTATATTGATGGGAAGCATTCCAAGACAAAGTATCACTTGTTGGTTTTTTCATCCTCTGGTTCTATGATACAATATGCTCTACAGATGCTAAATGGTCAAGACTCAACAATTGTTTCCGGATTAAACCCTGCTTACGAATTAGTGCCACAAGCTGATGCAAGATTAGTAGTGGAAGCTATTCAGAAATGGAATATATGTCAAAGACTTAATTTGCGGGGGCAAGAAGATAACGTTGACATATATGGTGATAATGGAATTCCTGAGGGCAATAAAATTTTTCCTGAAGAATCAAAAGAGGACACTATCAGGAGCCCAAAATTCAAGAATGAATTCGTGAAAGCAAATTCTTTATTGGAGGAGGATCGACATCTGTATATTTCCCAAGTTGAACTGCAGATGCATGAAACTCAGATTCCATTGTGGGCAAAGTCTGAGATATATTTTCATTCAATGGTGAAGGAAGCTACCATAATGGATGAAGCAGCCGCAGCAGGAGGGGAATTTGAGATTGAAAGGATTCCAACTCGCATGATACAAGCTAGGTTGAAACACTTAATTCCTGTTTTTGAATATCTTCAGTCCCCAAAAGTCCAACAAACAAGGGCCTACGCTCTGGATGGCAGGGTAAATGAACATTTGTTACATCAAAGTACTGGGAAGTCTGAAAATGGCACAATTTCACACTGCACAGCAAACTCTACTGAATTGGACAATGGCATTCAAACACCTGGATTGAGTGATCATCTTCTGCCAATAAAAACAAGATTCTATGTAAATAAAAATAACTCCCCCAAGGCTAATACTCGGTTTCAGATTGTAAATAATAGAATAGAGCACTTTAACATGGAAGGTCAACTCAAGTTTGTAAATAATGACAGAGAAGGCCTGCCAATGGGGAATCACATTGAAGATTAA 2631 0.4189 MMNDDQKPQQAGVVRSGRTNGFFPSSLRAISSYLRVVSSGASNVARSAASVASSIVDKDDDANSDQAIWAGFDKLEAEEGVTRQVLLLGFRSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRSAEKFANSRPLLAVCADGFFAGGSNVQDGLATPYNGSTSNFREQLNGNYLPTTVQFYSMRSQSYVHALKFRSVVYSVRCSSRMVAVSQSTQIHCFDAATLEREYTILTNPIVASYPGSGGLGYGPLAVGSRWLAYSGSPVTIYNYGHVNPQDLTTSASFPGFSSNGSLVAHYAKESSKQLASGIVSLGDMGYKKLSRYYSELLSDSNSSSRSVNSGGKGNGTINGHSADADNIGMVIIRDIVSKNVVTQLRAHKSPISALCFDPSGTILVTASVQGHNINVYKIMPCHSEAPDAGPSNVHLYKLLRGYTNAIIQDITFSDDSNWIMISSSRGTSHLYAINPQGGAVNIQALDCSLPTQNNGLGGINNQGALYPHSSVLQMHKKQSLCATGPPITLSVVSRIRNGTNGWRGTVSGAAAAAAGKMNSLSGAIASSFCSCKGSGMYIDGKHSKTKYHLLVFSSSGSMIQYALQMLNGQDSTIVSGLNPAYELVPQADARLVVEAIQKWNICQRLNLRGQEDNVDIYGDNGIPEGNKIFPEESKEDTIRSPKFKNEFVKANSLLEEDRHLYISQVELQMHETQIPLWAKSEIYFHSMVKEATIMDEAAAAGGEFEIERIPTRMIQARLKHLIPVFEYLQSPKVQQTRAYALDGRVNEHLLHQSTGKSENGTISHCTANSTELDNGIQTPGLSDHLLPIKTRFYVNKNNSPKANTRFQIVNNRIEHFNMEGQLKFVNNDREGLPMGNHIED 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0555 876 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 20 799 IPR045142 GO:0006914
Mibi01g0555 876 SMART WD40_4 373 413 IPR001680 GO:0005515
Mibi01g0555 876 SMART WD40_4 191 226 IPR001680 GO:0005515
Mibi01g0555 876 SMART WD40_4 428 468 IPR001680 GO:0005515
Mibi01g0555 876 Pfam Breast carcinoma amplified sequence 3 520 759 IPR022175 -
Mibi01g0555 876 Gene3D - 82 488 IPR015943 GO:0005515
Mibi01g0555 876 SUPERFAMILY WD40 repeat-like 85 470 IPR036322 GO:0005515
Mibi01g0555 876 MobiDBLite consensus disorder prediction 335 354 - -
Mibi01g0555 876 FunFam Breast carcinoma-amplified sequence 3 292 520 - -
Mibi01g0555 876 Pfam WD domain, G-beta repeat 377 406 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0555 Mibi-ChrMibi01 5202413 5207376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0555 01 5202413 5207376 Mibi07g0864 07 11198856 11204458 CCT
Mibi01g0555 01 5202413 5207376 Mibi01g0555 01 5202413 5207376 ECH