Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0554 ATGCGCTCCTCCAAAGCTGAAAGCCTTTGCACTCTGAGCTCTCTCATATTCAAACATCCTCTTCTAAACAAACCCTTTCCAGAATACTGTAATTCTAGACTCTACTGTGATTATGCGCTCTCAAGCCTCAAGTTTAAGCAACCCTCTGACTCAGAGGATCTGCCCAGTATGGTGTCTCAGCGAATCCGTTCAGTATTTCACTTGTATTGTTTCTTTTACGCAGCCGGTCAGTTGGACAATAGACCTGAACCCAGGGATGTTGACAATGCTAGAGATTTGGAAAAAATATCAGATATATCACGCTTGATGAAGAACATGCCTCACAGTATGGTATCTCTGAAACGTAAACAGTTTTCTCGTGAAAAGAAACGAAATTGTATGTTTGAATCCAGACAATCAAACCGTTTTGGCAAGTTAATTGTATCTTGTGCTGATAAACTAGGAGCAGAGGACGTGCTTAAGTTGTTCTGTAAGTTGGGACGAGAATTAGGTGCAAAAGATTACAATGTACTGATAGGAGCTTGCATAGATAAGGCTAGAGAAACTGAAGATGAAGGAATTGCAATAGGAGAAATGGCCAAGGTTTTTCACATCTTAAAATCGATGAGGGAACAAGGTTTTCAGCTTGAAGAGAAAACTTATTGCCTGCTTCTTTTGCATGTAATAGAGACGGGTATGGCAGAAGAGTTTCAGTTTTTTATTGACTTTATTAAAGACAACAATCCCAGCGCGCTTTCTAGATTGGGTTACTATGAAATGATGCTTTGGTTAAGAGTTAATGATGAAGAAAAGATTCGAGATGTTTGTGCCTATATTGCAAACAATGATGCTGCTGACATTTCAGAATTACGAGAAAATTATCTATTGGCTCTCTGTGAAAGTGATAGGAAGAAGGATATTTTGCAGGTGTTGGAAATTGTAGACTTGAAAAAGCTTTCATCTGCAGAATCTAAAGCAAAGATATTTCAATCATTAGGAAGGCTACTATTGGAGCCTGTTGCAGAGAAGCTCCTTTTGGATTTCAAAATATGTGACCATGAAGCAGATAATATCACAAACTTTATTGCTAGCTATGTTGTTAGCATGCCAAATTTAGCGATGGAGGATGTTGTCTTGAAATTCAAGGAATTGCACCAGACACTGAAAGTTCCACCTTCATCCTCATCATATGAGAAGCTCATTTTGCGCAGCTGTGATTTATTGAAGGTGCCTATAGCTCTTGATATTGTTGATGAAATGTGTGAAAGAGGCTTTAGCTTATCAACTGAGGTGTGGCACTCCATATTACAAACTTGTGCGGAAACCCATGAATATATTTTGGCTCATCAGATCTACTCCACCATTTGCCGGTACAATTTAAAGTTAAATGATGAAATATTCAGGCTTCTAATAGTTTTGTTCATGAAGCTGGGAGATTTTGAAAGCTCATATAAGATGCTTGATGAGTTGGATGAAAGAGGTTTGAAACCTACTACGCGCATGTATAATGCTATAATAGGAGAACATTTTCGAGAGAAGAACATTTGTGATGGGCTGAGAGCCCTTGAGCACATGCAGTGTGCCAATGTAAGACCTGATTTACAGACTTTGAGCTATATGATTAGCAACTCTGAAACTAAAGAGGATATAAACAAGTATTATGCAGAACTGAAGCGGTCTGGACTCCGACCCACAAAGCAAATTTTCACCACCCTTATAAGTGCTTATGCAGCATGTGGAGAGTTAGAGCAGGCTAAACAGGTGATCTTAGATCCATTCATACCAATGAATATCTTGAACGAAATCAAAGGTGTGCTTGTCTTCACTCTTGCATCTCATGGGCAATTGTCTGAGGCTCTTCTTATATATGAGGAAATGAGGCAATCTGGACAAAGTTTGAAGCCAAAAACTATATTAAGTCTCATTGAGTGCACTCAATCAGATGGACGGTTAGATAGGTTACTTCAGCTACTTGATGAATTGCACGAACCAGACTACTGGATTGATGGTTGCTGTAGCATTGTCGTGTACTGTATTCGGAACAAGTGTATAAGTTCTGCTGTTGACTTGTGTAAGCAACTCAAGGATAAATTCCCCAGTGATAGAGTTATGGAAACTCTCTTCAAAAAGGTATTTTCTTTTATCGAAGAGTCAGGGTCAACCCACTTGCAGACTGGCGTGGAGTTCCTTTGGGAAATGAAGGATAAGCTTGGCCTTGTTCCTCCTAAAGAGTATAATAATTTGTCTGCTAAGAGCTAG 2238 0.3923 MRSSKAESLCTLSSLIFKHPLLNKPFPEYCNSRLYCDYALSSLKFKQPSDSEDLPSMVSQRIRSVFHLYCFFYAAGQLDNRPEPRDVDNARDLEKISDISRLMKNMPHSMVSLKRKQFSREKKRNCMFESRQSNRFGKLIVSCADKLGAEDVLKLFCKLGRELGAKDYNVLIGACIDKARETEDEGIAIGEMAKVFHILKSMREQGFQLEEKTYCLLLLHVIETGMAEEFQFFIDFIKDNNPSALSRLGYYEMMLWLRVNDEEKIRDVCAYIANNDAADISELRENYLLALCESDRKKDILQVLEIVDLKKLSSAESKAKIFQSLGRLLLEPVAEKLLLDFKICDHEADNITNFIASYVVSMPNLAMEDVVLKFKELHQTLKVPPSSSSYEKLILRSCDLLKVPIALDIVDEMCERGFSLSTEVWHSILQTCAETHEYILAHQIYSTICRYNLKLNDEIFRLLIVLFMKLGDFESSYKMLDELDERGLKPTTRMYNAIIGEHFREKNICDGLRALEHMQCANVRPDLQTLSYMISNSETKEDINKYYAELKRSGLRPTKQIFTTLISAYAACGELEQAKQVILDPFIPMNILNEIKGVLVFTLASHGQLSEALLIYEEMRQSGQSLKPKTILSLIECTQSDGRLDRLLQLLDELHEPDYWIDGCCSIVVYCIRNKCISSAVDLCKQLKDKFPSDRVMETLFKKVFSFIEESGSTHLQTGVEFLWEMKDKLGLVPPKEYNNLSAKS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0554 745 Pfam PPR repeat 562 582 IPR002885 -
Mibi01g0554 745 Pfam PPR repeat 603 623 IPR002885 -
Mibi01g0554 745 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 456 490 IPR002885 -
Mibi01g0554 745 Gene3D Tetratricopeptide repeat domain 374 545 IPR011990 GO:0005515
Mibi01g0554 745 Pfam Pentacotripeptide-repeat region of PRORP 405 552 IPR033443 -
Mibi01g0554 745 Gene3D Tetratricopeptide repeat domain 589 728 IPR011990 GO:0005515
Mibi01g0554 745 PANTHER OS02G0132600 PROTEIN 39 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0554 Mibi-ChrMibi01 5183304 5190242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0554 385 662 Glycosyltransferase AT1G05670 18.771 7.46e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0554 01 5183304 5190242 Mibi01g0554 01 5183304 5190242 ECH