Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0203 ATGGCTCCTATATTTTCTATTCTTGTATTTTGTCTCGTGGTTGCTTCGAGCAATGCTCAGCTTCCACCCTCACCTGGCTACTTCCCAAGTTCCAGAATAAGTCCTGTGAGCTTTGATCAGGGCTTTAGAAATCTATGGGGAACTCAACATCAAAAAGTAGAACACGGCTCATTAACAATCTGGCTTGACTCCTCTTCAGGGAGTGGGTTCAAGTCGTTGCACTCATATCGATCAGGATACTTCGGTGCTGCAATTAAGCTTCAACCTGGTTATACTGCTGGAGTAATCACATCTTTATACCTTTCAAACAACCAAGACCACCCAGGAAACCATGACGAAATTGACATCGAGTTCTTGGGTACTACACCAGATAGGCCATACGTGTTGCAGACAAATGTATACATCAGAGGAAGTGGAGACAGAAATATTATTGGCAGAGAGATGAAGTTCCATCTTTGGTTCGATCCAACACAGGATTTTCACAACTATGCTGTTTTATGGAAACCCAATGAGATAATATTCCTGGTGGATGACGTGCCCATAAGGAGATATCCGAGGAAGAGCGACGCAACATATCCAACAAGACCAATGTATGTGTACGGATCTATATGGGATGCCTCATCTTGGGCTACAGAGAATGGAAGATACAGAGCAGACTATAGATACCAACCCTTCATTGGTAAGTACAGAATGTTCAGACTTGAGGGTTGCACCAGTGAAGCCCCAACCTCATGCCAGCCACCCTCTGTCTCGTCCTCTGCTCATGCAAGTCTTAGCCCTCTCCAGCTCAGGACCATGCAATGGGTCCATGACCACTACTTGGTTTATAACTATTGCCATGACTCCAAGAGAGACCACACCCTCACTCCCGAATGCTAG 879 0.4528 MAPIFSILVFCLVVASSNAQLPPSPGYFPSSRISPVSFDQGFRNLWGTQHQKVEHGSLTIWLDSSSGSGFKSLHSYRSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDRPYVLQTNVYIRGSGDRNIIGREMKFHLWFDPTQDFHNYAVLWKPNEIIFLVDDVPIRRYPRKSDATYPTRPMYVYGSIWDASSWATENGRYRADYRYQPFIGKYRMFRLEGCTSEAPTSCQPPSVSSSAHASLSPLQLRTMQWVHDHYLVYNYCHDSKRDHTLTPEC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0203 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 256 292 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mibi01g0203 292 FunFam Xyloglucan endotransglucosylase/hydrolase 25 292 - -
Mibi01g0203 292 Gene3D - 18 292 - -
Mibi01g0203 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 292 IPR013320 -
Mibi01g0203 292 PIRSF EndGlu_transf 3 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mibi01g0203 292 Pfam Glycosyl hydrolases family 16 39 221 IPR000757 GO:0004553|GO:0005975
Mibi01g0203 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 229 IPR000757 GO:0004553|GO:0005975
Mibi01g0203 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 32 292 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0203 Mibi-ChrMibi01 1991496 1992765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0203 4 292 Glycoside Hydrolase AT3G44990 66.090 3.05e-145 408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0203 01 1991496 1992765 Mibi07g0352 07 4373643 4375075 CCT
Mibi01g0203 01 1991496 1992765 Mibi01g0203 01 1991496 1992765 ECH