LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi01g0170	ATGTTTTGGAAGCTCGCTTCTTTATCTGCCTCCTCTCCTGTGGAGGCAATATTAGACCAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGATGAAATAATTCAAGAATGCAAGGCCTTAAACAGTCGACTCATTAACTTTCTGAGGGACAGAGCTCAGGTTGAGCAATTGTTACGCTATATAGTTGAAGAACCGCCGGAAGATGCTGAAAGCAAGCGTGCCTTCAAGTTTCCTTTCATTGCCTGTGAGGTTTTTACATGTGAAATTGATGTCATTTTGAAAACTTTGGTGGAGGAAGAAGAGTTAATGAACTTACTATTCTCCTTCCTGGAGCCAAACCGTCCTCATAGCACCTTGTTGGCTGGCTATTTTAGCAAGGTTGTTGTTTGCCTAATGATTAGGAAGACTTTGCCTCTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCAGCAACTGGTTGATTTGATAGGAATCACATCCATTATGGAGGTCTTGGTTCGATTAGTAGGTGCTGATGACCATGTGTACCCCAACTTTATAGATGTGATACATTGGTTGGTTGAGAGCAACCTTTTAGAGATGATTGTTGATAAATTAAGCCCATCTGATCCTCCTGAAGTTAATGCTAATGCAGCTGAAACATTGTGTACAATAGCTCGAAATGCTTCATCTGCTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTGGCAAGAGTTTTGGATCACGCCTTGCAATATTCACAATCAAAATCTAGCCTCATTTGCTCTCTCTCTGTGTGTATTTCTATGCTGGATTCCAAAAGATCTGCTAGCTCGACTCCCCTTTTTCATTCTTTCCGTAGTCAATACATGTATGAGGCTCCAGTTCCTGTTAACCCGGAAACTATTGGTGCAATGCTTAAAAAACTTGGTGACTTGCTTAAGCTTTTGGATGTATCATCCGATGAAAAGGTATTGCCTACAACATATGGAGAATTGAGGCCTCCTCTTGGGAAGCATCGATTAAAGATAGTTGAGTTTATTGCTGTACTTTTTAAAGCTGGGAATGAATTGGCCGAAGTAGAATTGGTCAACTCAGGAATCATTCGACGAGTCATTGATCTTTTCTTTGAATATCCATTCAATAATTCATTACACCATCATGTAGAAAGCATAATACTGTCATGTTTGGAGAGCAGAACTGATGTCTTTGTTAATTATCTTCTCCGAGAATGTGATATAACTGGAAAAGTTCTCCGAGCTGATAAAAATCCTGTTTTTTATAGTGATGGCGACCAGCCAACGGCAGCTGCTGCTGGCAAACAGACACCACGGGCGGGAAACATTGGACATATCACTCGAATTGCCAACAAACTTGTTAACTTGGCTCATGACCAAAGTCACATACAGGCCTTTCTTCAGGAAAACAACGAGTGGAATGAATGGCAAGCTACAGTTCTACAAGAGCGTAATGTGGTTGAGAATGTTCATCGATGGGCTTGTGGACGCCCCACTGCATTACAAGATAGGATGAGGGATAGTGATGACGATGACCTTCATAATAGAGACTACGATGTTGCAGCATTAGCTAATAATTTGAGCCAAGCTTTCAATTACAAAATTTATGGAAACGAGGATAATGATGAGGACCATGGAGGGCTTGGTCGAGGTGATGAGGATGTTTACTTTGAAGATGATTCTGCTGAAGTAGTCATATCATCTCTAAGACTTGGTGATGATCAAGGAAGTAGCCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGATAGAAATGATGATGCATCTGGTGGAACGTCATCATCTGATATGATGGATGAGATTAACTTGAATGGAGCTACGAATGGTGGTAACAACAGTAGTGATGATGAGGTAGTGGTAGGGGAGGAAGAGGAATTGGCTGAAAGCAGAAATGCCACAAACGACTCCTCTAACTTGAGTACAAACTTCTTCAGTGGATTAAGTGATGGAAAATCAATGAACGGCGACGCTATAAACTTGGAAAGTGAGAAGGCAGGTGCTGGACATGATATGGGATTTTTCAGGTTCGAGGCATCTAAAAAGGAGGACCTGTTTGGGGATAGGTCATTACCTGATTGGACGGGATGGGCTGAACCATCAGATATGCAAGTTCCTGGTTCAAGCACTAATCCATTTGTTGATCAAGATGATTCTGATAGCAATCTATCCACTAAATCTCAATTAGGCAGCCCCAATTCCTGTTCACCTTCAAACGGGGAATCCGCACCTGCAAATGGTTCACCAACTTCTAGAGATTCAAGTGAGCGGGAAGGGGACTTGAACCAAAGATCAGCACCGGTACCCTCCCTTTTTGAAGAGGATGTTGAATTTGTGGGTGTGGAATTAGAAGGTACTGAGAAAGCGATGGAGCAGGCTCTCAAAGAAGGAATAGTCGGGGAAGCAGGACCATTGAAAAGGAATGTCGTCCCAAAAGTGCCAGAAAAGGATAATTCTGAAGAGGGGGGGCCTGGAATGAAGGAATTCAATGACGCAAATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA	2562	0.42	MFWKLASLSASSPVEAILDQENFTLEELLDEDEIIQECKALNSRLINFLRDRAQVEQLLRYIVEEPPEDAESKRAFKFPFIACEVFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSTLLAGYFSKVVVCLMIRKTLPLMNYVQAHQNVFQQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVIHWLVESNLLEMIVDKLSPSDPPEVNANAAETLCTIARNASSALAIKLSSPSFVARVLDHALQYSQSKSSLICSLSVCISMLDSKRSASSTPLFHSFRSQYMYEAPVPVNPETIGAMLKKLGDLLKLLDVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLFKAGNELAEVELVNSGIIRRVIDLFFEYPFNNSLHHHVESIILSCLESRTDVFVNYLLRECDITGKVLRADKNPVFYSDGDQPTAAAAGKQTPRAGNIGHITRIANKLVNLAHDQSHIQAFLQENNEWNEWQATVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHNRDYDVAALANNLSQAFNYKIYGNEDNDEDHGGLGRGDEDVYFEDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRNDDASGGTSSSDMMDEINLNGATNGGNNSSDDEVVVGEEEELAESRNATNDSSNLSTNFFSGLSDGKSMNGDAINLESEKAGAGHDMGFFRFEASKKEDLFGDRSLPDWTGWAEPSDMQVPGSSTNPFVDQDDSDSNLSTKSQLGSPNSCSPSNGESAPANGSPTSRDSSEREGDLNQRSAPVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVVPKVPEKDNSEEGGPGMKEFNDANYWRVDQEVAVLE	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	817	840	-	-
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	591	649	-	-
	Mibi01g0170	853	PANTHER	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	1	814	IPR007587	GO:0019903\|GO:0043666
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	818	832	-	-
	Mibi01g0170	853	SUPERFAMILY	ARM repeat	53	424	IPR016024	-
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	701	779	-	-
	Mibi01g0170	853	Pfam	SIT4 phosphatase-associated protein	356	490	IPR007587	GO:0019903\|GO:0043666
	Mibi01g0170	853	Pfam	SIT4 phosphatase-associated protein	131	352	IPR007587	GO:0019903\|GO:0043666
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	710	760	-	-
	Mibi01g0170	853	MobiDBLite	consensus disorder prediction	591	624	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi01g0170	Mibi-ChrMibi01	1662332	1669628	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi01g0170	01	1662332	1669628	Mibi07g0293	07	3644809	3660807	CCT
	Mibi01g0170	01	1662332	1669628	Mibi01g0170	01	1662332	1669628	ECH