Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02945 ATGGGAGTACCTTTCCTCACACAACCCCACAAAACCACCATAGCTTCTTCATCATCATCTTCAAAACCATTCAAGCTTCCCCACAGAATTCACACCACCAACAATGGTTCTGCCAACCGTTCTGTTAAACCCCAGAAGCTTAATTCAGATATTTCTCCTCACAGAGCTGTGTCAGCTGTGAGATTGATGAGGATTGAACTTGGTGGTGCTTTTGCGGACCTTCTCAATGAGAAAGGGAAAGGTTCTGGTGAAAATGAGATGGGTTATGTTCAAAGAACACTTGGATTTTGCACTCGAGAATTAAATAATCAAGACCTTAGATTGGTTACAGAGATTGTTGGGGGCACAATTCGTTGGAGGAGATACCTTGATCATTTAATCAGTTCATTGTGTCATGATAAAGATATATCCAGTATGGAACCTCTTCTCTTACAGATTCTACGAATTGGCTTCTATGAGATCGTCAAATTAGATATGCCACCTTATGCTGTTGTAGATGAGAATGTGCAGCTTGCGAAAGCTGCTCTCAGGCCGGGTGCTGGCAACATGGTCAATGGAATCCTCCGAAAGCTAGTTGTGCTCAAGGAAAATGAAACTCTTCCTTTGCCCAAAGTGGAGGGTGATGATCGTTCTCAAGCACGTGCGCTGGCAACTCTCTACTCACATCCAGTTTGGATCGTAAGGAGGTGGACAAAGTATCTTGGCCAGGAAGAAGCCATTAAATTGATGATATGGAACAACAGTGAACCGAGTTATAGCTTAAGAGCAAATCGGGCAAAGGGTTTTTCAAGAGATGACCTTGTGACAGAGCTTAATGCATTGAAGGTCCCACACAATCTTTCATTGCATTTGGATGACTTTGTTCGCATCAAGACCGGGTTGCAGATTATCATTCATGCCGGCCTATTCAAAGAGGGTTTATGTTCAGTTCAGGATGAGAGTGCAGGTCTGATAGTTTCTGTTGTTGATCCTCAACCTGGTGAGACTATTGTTGATTGTTGTGCTGCTCCTGGTGGAAAGACCCTCTACATGGCCGCTCATTTAAGTGGACAAGGTATGGTATATGCAGTTGATGTAAATAGTGGTAGGTTGAGAATTCTTAAAGAGACAGCAAAGTTACACCAAGTAGATGGTGTCGTTACCACTGTCCATGCCGATCTTCGTACATTAACTGACGGTGAACCACTTAAAAGTAACAAAGTTTTGTTGGACGCACCATGCTCAGGACTTGGTGTTCTTTCAAAGAGAGCGGACTTACGTTGGAACAGGAAGTTGGAGGATATGGAACAATTGAAGAAATTACAGGATGAGCTTCTGGATGCAGCATCCACATTGGTAAAACCCGGAGGAGTATTAGTTTACAGTACATGCTCCATAGATCCTGAAGAGAATGATGATAGGGTAGCTGCTTTTCTAGAAAGACATCCGGATTTTCACATTGATCCTGTAGACAGATATGTTCCACCTGATTTTGTGACACCGAATGGTTTCTATTCATCCAACCCGGTAAAACATTCTCTGGACGGCTCCTTTGCAGCCCGTTTGGTACGCACATTGTAA 1560 0.4327 MGVPFLTQPHKTTIASSSSSSKPFKLPHRIHTTNNGSANRSVKPQKLNSDISPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFCTRELNNQDLRLVTEIVGGTIRWRRYLDHLISSLCHDKDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVQLAKAALRPGAGNMVNGILRKLVVLKENETLPLPKVEGDDRSQARALATLYSHPVWIVRRWTKYLGQEEAIKLMIWNNSEPSYSLRANRAKGFSRDDLVTELNALKVPHNLSLHLDDFVRIKTGLQIIIHAGLFKEGLCSVQDESAGLIVSVVDPQPGETIVDCCAAPGGKTLYMAAHLSGQGMVYAVDVNSGRLRILKETAKLHQVDGVVTTVHADLRTLTDGEPLKSNKVLLDAPCSGLGVLSKRADLRWNRKLEDMEQLKKLQDELLDAASTLVKPGGVLVYSTCSIDPEENDDRVAAFLERHPDFHIDPVDRYVPPDFVTPNGFYSSNPVKHSLDGSFAARLVRTL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02945 519 MobiDBLite consensus disorder prediction 9 50 - -
Mepo7g02945 519 FunFam 16S rRNA (Cytosine(967)-C(5))-methyltransferase RsmB 209 313 - -
Mepo7g02945 519 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 213 517 IPR029063 -
Mepo7g02945 519 PRINTS Viridiplantae FMU-related RCMT signature 84 100 IPR023268 -
Mepo7g02945 519 PRINTS Viridiplantae FMU-related RCMT signature 199 212 IPR023268 -
Mepo7g02945 519 PRINTS Viridiplantae FMU-related RCMT signature 476 488 IPR023268 -
Mepo7g02945 519 PRINTS Viridiplantae FMU-related RCMT signature 60 83 IPR023268 -
Mepo7g02945 519 NCBIfam 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 99 516 IPR004573 GO:0006364|GO:0008649
Mepo7g02945 519 Gene3D - 70 204 IPR035926 -
Mepo7g02945 519 CDD AdoMet_MTases 329 455 - -
Mepo7g02945 519 SUPERFAMILY NusB-like 91 226 IPR035926 -
Mepo7g02945 519 FunFam Ribosomal RNA small subunit methyltransferase B 314 518 - -
Mepo7g02945 519 PRINTS RNA (C5-cytosine) methyltransferase signature 399 411 IPR023267 GO:0001510
Mepo7g02945 519 PRINTS RNA (C5-cytosine) methyltransferase signature 331 341 IPR023267 GO:0001510
Mepo7g02945 519 PRINTS RNA (C5-cytosine) methyltransferase signature 302 316 IPR023267 GO:0001510
Mepo7g02945 519 PRINTS RNA (C5-cytosine) methyltransferase signature 449 465 IPR023267 GO:0001510
Mepo7g02945 519 PRINTS RNA (C5-cytosine) methyltransferase signature 500 517 IPR023267 GO:0001510
Mepo7g02945 519 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 242 518 IPR001678 GO:0008168
Mepo7g02945 519 Gene3D Vaccinia Virus protein VP39 317 519 IPR029063 -
Mepo7g02945 519 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 175 517 IPR023267 GO:0001510
Mepo7g02945 519 Pfam 16S rRNA methyltransferase RsmB/F 321 515 IPR001678 GO:0008168
Mepo7g02945 519 MobiDBLite consensus disorder prediction 1 50 - -
Mepo7g02945 519 Gene3D Sun protein; domain 3 209 315 - -
Mepo7g02945 519 FunFam Ribosomal RNA small subunit methyltransferase B 52 201 - -
Mepo7g02945 519 Pfam NusB family 94 192 IPR006027 GO:0003723|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02945 Mepo-Chr7 40409551 40416730 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02945 K03500 - gmx:100779327 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02945 7 40409551 40416730 Mepo7g02945 7 40409551 40416730 ECH