Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01654 ATGGCCATGGCACTTCGAAGACTCACTTCCACCATCAACAAACCAACTTCTCTCTATCGTTTGTCATCTTCTCTCTCCGCTCAACACACTCACAAATCTCACCCCGATTGGATTAAACAACTCAACGATCCTCTTGGTGTAGTAGATCCTGAGATCGAAGATATAATCGAACTTGAAAAAGCTCGTCAATGGAAGGGACTAGAGCTTATACCTTCAGAAAATTTTACGTCGTTGTCGGTGATGCAAGCGGTTGGATCGGTTATGACGAATAAATACAGTGAAGGTTATCCTGGTGCTAGATACTATGGTGGAAATGAGTACATTGACATGGCTGAGACTTTGTGTCAGAAGCGTGCATTGGAAGCTTTTGGATTGGATCCAACACAATGGGGAGTCAATGTGCAGTCATTATCTGGATCTCCTTCTAACTTCCAAGTTTACACTGCTTTATTGAAACCTCATGAGAGAATTATGGCACTTGATCTCCCCCATGGTGGGCATCTATCACATGGATATCAGACTGACACCAAGAAGATATCAGCTGTATCTATATTCTTTGAAACAATGCCATACAGGTTGGATGAGAGCACTGGTTATATTGACTATGACCAGATGGAGAAAAGTGCTGCACTTTTTAGGCCAAAATTGATAGTTGCCGGTGCTAGTGCTTATGCCCGTCTTTATGATTATGCGCGTATTCGCAAGGTCTGTGATAAACAGAAGGCAGTTATGTTGGCTGATATGGCACACATCAGTGGATTAGTTGCTGCAGGTGTTATTCCTTCTCCTTTTGATTATGCAGATGTTGTAACAACCACAACACATAAGTCACTTCGTGGGCCACGTGGGGCTATGATATTCTTCAGGAAGGGTCTGAAAGAGATAAACAAGAAAGGGCAGGAAGTGCTGTATGACTACGAAGACAAAATAAATCAGGCTGTTTTTCCTGGACTTCAAGGTGGTCCTCACAATCACACTATTACAGGCTTAGCAGTTGCATTGAAGCAGGCTATGACACCAGAATTCAAGAATTACCAGAAACAAGTTCTTAGTAACTCCTCGACATTTGCACAGAGCTTGTTAGAGAAAGGCTATGACCTTGTATCTGGTGGAACTGAGAACCATTTGGTGTTGGTAAACTTAAGAAACAAGGGCATTGATGGCTCAAGGGTTGAGAAGGTGTTAGAATCAGTTCATATAGCTGCCAATAAAAACACTGTTCCAGGAGATGTGTCTGCAATGGTTCCTGGAGGGATCAGAATGGGAACTCCTGCTCTTACATCTAGGGGTTTTGTTGAGGATGATTTTAAAAAAGTAGCTGAATACTTTGATGAGGCTGTCAAAATAGCCTTACAGATTAAGGAAAATTCTAAAGGCACAAAGTTGAAGGATTTTGTGGAAGCTATGGAGTCAGATTCACAAGTTCAATCTCAAATCGCTGATCTCCGCCGTGAAGTAGAAGGTTATGCTAAGCAGTTTCCCACAATTGGGTTTGAGATAGAGACAATGAAGTATAACAAGTGA 1524 0.4199 MAMALRRLTSTINKPTSLYRLSSSLSAQHTHKSHPDWIKQLNDPLGVVDPEIEDIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFGLDPTQWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEINKKGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSTFAQSLLEKGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEDDFKKVAEYFDEAVKIALQIKENSKGTKLKDFVEAMESDSQVQSQIADLRREVEGYAKQFPTIGFEIETMKYNK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01654 507 Hamap Serine hydroxymethyltransferase [glyA]. 44 497 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo7g01654 507 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 268 284 IPR019798 GO:0030170
Mepo7g01654 507 Gene3D - 74 347 IPR015421 GO:0003824
Mepo7g01654 507 Gene3D Aspartate Aminotransferase, domain 1 49 494 IPR015422 GO:0003824
Mepo7g01654 507 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 32 499 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo7g01654 507 FunFam Serine hydroxymethyltransferase 74 347 - -
Mepo7g01654 507 PIRSF SHMT 27 502 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mepo7g01654 507 Pfam Serine hydroxymethyltransferase 47 442 IPR039429 -
Mepo7g01654 507 SUPERFAMILY PLP-dependent transferases 36 498 IPR015424 -
Mepo7g01654 507 FunFam Serine hydroxymethyltransferase 335 495 - -
Mepo7g01654 507 CDD SHMT 48 469 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01654 Mepo-Chr7 25930253 25939246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01654 K00600 - gmx:100816213 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01654 7 25930253 25939246 Mepo7g01654 7 25930253 25939246 ECH