Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01645 ATGGATTCGGAATGGGAAACTCTTCATACAATCTTAACCAAATCACTCACCATCCTTTCCTGGCCTCCGATTACTTTGCTTTGTCCTCTATATGTTTCTATTCGGACGTTGGAGAGTGATTGTCGTCACAGTAATCAACGATGCCTTGTTTTTTGGGTTCTCTTTGCTTTCTCTATGATTATCGAACGTGAATTTGCAGTCTTATTTAGTTGGTTCCCATGGTGGTCTCATGTGAAAGCCATGGCAACTATCCTCTTGTTAATACCTTATTTTGGTGTTGCGCCGTACATCTACAAGCTCTTAATAAAACACAACTGTACTGGGAACATATGTGCATGGACGATGAACATCTTCAATCTGAAAATCACACATTTTGAATTGAATGAGGATAGAAACATACTTTCTGAATCAGATACGGGCAGAAAAGCATTTTTAGAATCGGATGGTAATAGCAAAAGTGTTGAAGAATCAGATGATAATAGCAAAATTGTTGAAGTCTCTGCCCAGACAATTATTACAACTCATTTACAAGAGAAGAAACTTTTAGTATATCAGGGGAGAGATGATCTTGGAGCTGATTGTAACAAGACAAACAGCGTTTATTATACAAGTAAAAAGAAAGTCCAGAAGGAATGGAGTTCTGCTTTGTGTCAAATTAATACTACAAGTGAAAATTGCTTAGGGTCACATCTTCAAGGGAAGCAACACAAGGCTAAGGAAAAAGAACTTCGAGTCGGGTTACATGCAACGAATATACCGTATGTTCTATCCTTTACGCAGGAAAGAATTAAAGGAATGGTTCTACTTAAGAATCTCAACCAAATTGCAAACATTCTGAATCCAGTTTCTAGATCCATAATATGGTGTGAATGGAAAAAGCCGGAATTTGGATGGACAAAACTAAATACCGATGGTTCTGTAAATAAAGAAACAGCTGGTTTTGGTGGTCTGCTTCGTGATTATCGGGGTGAACCAATTTGCGCATTTGTCTCGAAAGCTCCTCAAGGAGATATTTTCTTGGTGGAACTTTGGGCTATATGGAGAGGCCTCATTCTCTCTTTAGGTCTTGGGATAAAATCAATATGGGTAGAGTCAGACTCCATGAGTGTTGTTAAGACAATCAATAAAGTGCAACAATGTCCAAAAGCTGAAACCTGTTTGAAAGAAATTTGGAAACTATTGAGTAAGTTTGACGAGTCTCGGATTTCTCACTCGTGGCGCGAAACTAATAGAGCGGCAGATCATCTTGCAAAGATGGCTGTTTGTGGTAATGATGTGGTTTTGTGGCCAGCTGATTTTTCACATAGCCTTTGCAATATCATTCAAGATGATGCCAGAGGAACAAAATATCTAAGACGGTGA 1362 0.3862 MDSEWETLHTILTKSLTILSWPPITLLCPLYVSIRTLESDCRHSNQRCLVFWVLFAFSMIIEREFAVLFSWFPWWSHVKAMATILLLIPYFGVAPYIYKLLIKHNCTGNICAWTMNIFNLKITHFELNEDRNILSESDTGRKAFLESDGNSKSVEESDDNSKIVEVSAQTIITTHLQEKKLLVYQGRDDLGADCNKTNSVYYTSKKKVQKEWSSALCQINTTSENCLGSHLQGKQHKAKEKELRVGLHATNIPYVLSFTQERIKGMVLLKNLNQIANILNPVSRSIIWCEWKKPEFGWTKLNTDGSVNKETAGFGGLLRDYRGEPICAFVSKAPQGDIFLVELWAIWRGLILSLGLGIKSIWVESDSMSVVKTINKVQQCPKAETCLKEIWKLLSKFDESRISHSWRETNRAADHLAKMAVCGNDVVLWPADFSHSLCNIIQDDARGTKYLRR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01645 453 Gene3D - 298 421 IPR036397 GO:0003676
Mepo7g01645 453 CDD RNase_H_like 301 418 IPR044730 -
Mepo7g01645 453 Pfam TB2/DP1, HVA22 family 29 103 IPR004345 -
Mepo7g01645 453 PANTHER OS05G0353850 PROTEIN 278 433 - -
Mepo7g01645 453 Pfam Reverse transcriptase-like 302 420 IPR002156 GO:0003676|GO:0004523
Mepo7g01645 453 SUPERFAMILY Ribonuclease H-like 298 425 IPR012337 -
Mepo7g01645 453 Gene3D Classic Zinc Finger 201 248 - -
Mepo7g01645 453 Pfam Zinc-finger of C2H2 type 216 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01645 Mepo-Chr7 25743390 25747069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01645 290 421 Glycoside Hydrolase AT2G33160 27.536 5.26e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01645 - - gmx:102661917 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01645 7 25743390 25747069 Mepo7g01645 7 25743390 25747069 ECH