Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01527 ATGGCAAGGGATCAGAATGATTATCGTTTGGAGGAAGAAGAGACTATTGAAGATATGGATACGGTGTTTAATGAAGTTATTGATAATGTTGTGGAGCGTATGATGGACCCTTGTGGGAATTATCTTGTGCAAAAATTGCTCGAGTATTGTAGTGATGATCAAAGGTTGCAGATTATTCTTAAGTTGACTAAAGAACCGAGTCAACTAGTCAAAACCTCATTAAACACACATGGCTCAAGAGTGGTCCAAAAGCTGATTTCTACCCTCAAATCAAGGAGGGAAATTGCATTGGTGAGGTCTGCAATTCTACCTGGTTTTCTTGATCTTGTTAAGGATCCGAATGGAAATCATGTTATACAACGTTGCTTGTCATGCTGGAGTGTTCAAGATAATGAGTTTATATATGATGCTGCAACAAAGTTCTGTGTTGATATTGCTACTCATCGACATGGATGCTGTGTGCTTCAACACTGCATTAAATTCTCTATGGAAAACAGTCAAGAAAAGCTGGTTAAAGAAATTTGCAAACATGGCTTTCACCTAGCTCAAGATAAATACGGAAACTATGTTGTTCAGTACATTATACAGATGCTGAATCCAAGTGCCATAGCCGAACTTACTGCGCAGCTCGAAGGGAACTATGCGCTACTCTCCGCGCAAAAATATAGTAGCCATGTGGTTGAAATGTGCCTCAAAGATATTGTAGAGATTAGAGCAAGGATTGTCCAAGAACTGCTTTTTGTTCCTCACTTTGAGCAACTACTGCAAGACCGATATGCTTACTATGTCGTTCAATGTGCTCTCAAATTTACTGAGGGTTCTCTGCATGCAGCTTTGGTTGAAGCAATTAACAAAACCTTGGGTACAACAAGCCCATATTGCAGGTTGTAA 891 0.3962 MARDQNDYRLEEEETIEDMDTVFNEVIDNVVERMMDPCGNYLVQKLLEYCSDDQRLQIILKLTKEPSQLVKTSLNTHGSRVVQKLISTLKSRREIALVRSAILPGFLDLVKDPNGNHVIQRCLSCWSVQDNEFIYDAATKFCVDIATHRHGCCVLQHCIKFSMENSQEKLVKEICKHGFHLAQDKYGNYVVQYIIQMLNPSAIAELTAQLEGNYALLSAQKYSSHVVEMCLKDIVEIRARIVQELLFVPHFEQLLQDRYAYYVVQCALKFTEGSLHAALVEAINKTLGTTSPYCRL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 173 208 IPR001313 GO:0003723
Mepo7g01527 296 SUPERFAMILY ARM repeat 15 288 IPR016024 -
Mepo7g01527 296 FunFam Pumilio homolog 9 1 295 - -
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 179 201 IPR001313 GO:0003723
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 215 246 IPR001313 GO:0003723
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 142 175 IPR001313 GO:0003723
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 29 62 IPR001313 GO:0003723
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 106 136 IPR001313 GO:0003723
Mepo7g01527 296 Pfam Pumilio-family RNA binding repeat 69 87 IPR001313 GO:0003723
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 137 172 IPR001313 GO:0003723
Mepo7g01527 296 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 2 285 - -
Mepo7g01527 296 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 1 296 IPR033133 GO:0003723
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 101 136 IPR001313 GO:0003723
Mepo7g01527 296 Gene3D - 1 295 IPR011989 -
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 25 61 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 64 99 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 209 243 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 137 172 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 25 60 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 173 208 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 246 281 IPR001313 GO:0003723
Mepo7g01527 296 SMART pum_5 101 136 IPR001313 GO:0003723
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 244 281 IPR001313 GO:0003723
Mepo7g01527 296 ProSiteProfiles Pumilio RNA-binding repeat profile. 64 99 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01527 Mepo-Chr7 24149190 24153515 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01527 - - tpra:123904497 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01527 7 24149190 24153515 Mepo7g01527 7 24149190 24153515 ECH