Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01043 ATGTCTCGATTCATCTCAAGATGCAAAAAAATGAAGGAAATGACTTCATTTCATGGGACCCACATGGAATTTGGTTCAGGTAACCGTCGAACCGGGTTCACTTTACTAAACCGGTTCAACCGGGTTCAGGCGATTTCAACTCATCTGAATCACATCATAGTCGCCGGAGGTGGTAAACAATGCCGGCGGGTGGCGGTGGTCGGAGTTCAAGAAAGGTACAAGTGGGGCCGTGGTGGGTCGGATGGTGATATGCATAATCCGACCCGGAAAATTCGGGCTGAGGCTAATTGTCCAAGGTGTTCCAAAGATATGAATTTGTTTTTCTCTAATCGTCATATGCAAAGTAATGGTGATTCCGGCGGCGGTAACGGCGAAAATTTAGGTTCTAATGGTGATGGAGGAGATGGTGGTTATCAAGCAGTGAATTTATGTCCAAATTGTAAAACAGCGTATCATTTTCGACCGTATAATACATCACCATTACAAGGTACATTTGTTGAAATTGGTAGAGTGAGTAATAGTAATGGTGGTAATAGTAAAACTCAATTATCTAGAAGGTTTAAAAATGGTATTGGAAAAGACAGTAATAGTATTAAGAGTGGTCATCATGGAGGTGAGGATTTAGGTCTAAATGGTAGTGCTAGTAATTGGCTTGAAGTGTCAATGTGGGAAACTTTGAGAAATTACAATGGTGGTGGTGGAAATAGTGGTAGTGGTGGTGGTGGTGGTAATAATGGGGAGCCGCCAGAGACATGGCCACTGCCGGTAGGTGGTGGTAATGGGAATGGTTTGGCTGTGCATACTCCTCCAGGTCCTCCTTTTGCACCTGGGGTTAATGTTGTAAGGGCTAGGGGGCCGCAGGAGGGTGGTCCGGGTGGTGGTGGTAATGGTGAGAAGAATGCATGGGGAGGGTCTAATTTGGGGAAGGATTTGCCTTCACCAAAGGAGATTTGTAAAGGTCTTGATAAGTTTGTTATTGGACAAGGTAGAGCCAAAAAGGTGCTTTCTGTAGCTGTTTATAATCACTATAAAAGAATATACCATGCCACTTTACCGAAAGGGTCGGGTGCAGATTCAGGAATTTCAGGTATATTAGATGACGACGAAAATGTTGAGCTAGAAAAGAGTAACGTTCTTTTAATGGGTCCAACAGGATCAGGAAAGACACTACTTGCAAAAACACTAGCTCGTTTTGTGAATGTTCCGTTTGTCATTGCCGATGCTACAACCTTAACACAGGCCGGTTATGTTGGAGAAGATGTCGAATCAATACTATATAAACTACTTGCGGCAGCAGATTACAATGTTGCAGCAGCTCAGCAAGGAATAATTTACATTGACGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATCAGCCGAGATGTTTCTGGTGAGGGTGTTCAGCAGGCATTATTAAAAATGCTCGAAGGAACTATAGTAAATGTTCCAGAGAAAGGAGCCAGGAAAAATCCACGGGGTGATAACATTCAGATAGACACAAAGAACATTCTTTTCATATGTGGTGGAGCATTTATTGATCTTGAAAAAACCATTTCAGAGAGACGGCAAGATTCTTCTATTGGTTTTGGAGCACCAGTTCGTGCCAACATTAGAAGCAGTAGAATAATCGATTCTGCAGTAGCATCATCTTTACTTGAATCAGTGGAAAGTTCCGATCTTATTGCATATGGTCTCATACCAGAGTTTATTGGACGATTCCCCATCTTAGTTAGCTTGTCAGCCTTAACCGAAGAGCAACTTATGCAGGTCCTCACAGAACCAAAACATGCTCTCGGTAAACAGTACAAGAAATTAGTCGGCATGAATGAGGTAAAACTACACTTCACAGAGAAAGCTCTGAGAATGATAGCGAAGAAAGCAATGGCCAAAAATACTGGTGCCAGGGGTTTAAGAGCCTTAATAGAAAACATTTTAACCGATGCCATGTATGAGATTCCCGATATTAAGACAGGAAGCGACCGCATTGACGCCGTAGTTGTTGATGAAGAATCAGTAGGATCACTAACAGCTCCTGGATGTGGAGGAAAAATTCTTCGCGGAGATGGTGCTTTGGAGCAGTACCTAGCTAAAATAAAGGATTCAGAGGATGTAGTAGCTGAATCAGAGTTACAGGATAGGGATTCAGATACCTCATCAAGAGCCATGAGCATGTAA 2184 0.4263 MSRFISRCKKMKEMTSFHGTHMEFGSGNRRTGFTLLNRFNRVQAISTHLNHIIVAGGGKQCRRVAVVGVQERYKWGRGGSDGDMHNPTRKIRAEANCPRCSKDMNLFFSNRHMQSNGDSGGGNGENLGSNGDGGDGGYQAVNLCPNCKTAYHFRPYNTSPLQGTFVEIGRVSNSNGGNSKTQLSRRFKNGIGKDSNSIKSGHHGGEDLGLNGSASNWLEVSMWETLRNYNGGGGNSGSGGGGGNNGEPPETWPLPVGGGNGNGLAVHTPPGPPFAPGVNVVRARGPQEGGPGGGGNGEKNAWGGSNLGKDLPSPKEICKGLDKFVIGQGRAKKVLSVAVYNHYKRIYHATLPKGSGADSGISGILDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSSRIIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGKQYKKLVGMNEVKLHFTEKALRMIAKKAMAKNTGARGLRALIENILTDAMYEIPDIKTGSDRIDAVVVDEESVGSLTAPGCGGKILRGDGALEQYLAKIKDSEDVVAESELQDRDSDTSSRAMSM 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01043 727 MobiDBLite consensus disorder prediction 111 126 - -
Mepo7g01043 727 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 305 583 - -
Mepo7g01043 727 Gene3D - 305 583 IPR027417 -
Mepo7g01043 727 SMART ClpB_D2_small_2 585 678 IPR019489 -
Mepo7g01043 727 MobiDBLite consensus disorder prediction 229 257 - -
Mepo7g01043 727 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 584 687 - -
Mepo7g01043 727 SMART AAA_5 374 570 IPR003593 GO:0016887
Mepo7g01043 727 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 308 676 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Mepo7g01043 727 MobiDBLite consensus disorder prediction 111 132 - -
Mepo7g01043 727 Pfam C-terminal, D2-small domain, of ClpB protein 585 654 IPR019489 -
Mepo7g01043 727 Pfam AAA domain (Cdc48 subfamily) 374 578 IPR003959 GO:0005524|GO:0016887
Mepo7g01043 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 310 670 IPR027417 -
Mepo7g01043 727 Coils Coil 694 714 - -
Mepo7g01043 727 Gene3D - 584 684 - -
Mepo7g01043 727 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 92 702 - -
Mepo7g01043 727 MobiDBLite consensus disorder prediction 284 308 - -
Mepo7g01043 727 CDD RecA-like_ClpX 312 582 - -
Mepo7g01043 727 MobiDBLite consensus disorder prediction 708 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01043 Mepo-Chr7 15869694 15877004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01043 378 477 Miscellaneous Gene Families AT3G02450 37.624 5.42e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01043 K03544 - gmx:100805340 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01043 7 15869694 15877004 Mepo7g01043 7 15869694 15877004 ECH