Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04341 ATGGTTCTAGCGGAATTAGGAGGAAGCATTACTCGTGCTCTTCACAAGATGAACAACACAACAGTGATTGACGAGAAAGCTCTCACTGATTGTCTCAATGTGATCAATCAAACTCTCCTTCAATCCGATGTTCGATTTGAGCTTATTCGAGACATGCAGATTAATATCAACAACATTGTTAATCTTGAACAGCTCGCCGCCGGTCACAATAAACGCAAAATCATTCAACAAGAAAGCCCTGTTTTGTTCCTAAAAGAGGAAAAACAAGTGTTGTTATGTTTGTTGGTTTACAAGGGAAGTTTTGGTTTGGTTTGTATTGCCTTATGCTTGCTGTTTTGGCATCAGCAGCACTACTGTCATGTTCGGTTTGGTTTAGGGGTTACCGCAAATTCGTGCCCTTTCTACTGTTTTTCGTCTTTGTCCCCTATTCCACGTCTTGTACGATATTGCACCGACATTTCTGATAGGGTGTCCGTTTCTGACACATGTGATTACATTCAATCTAATTATTACCGGTGTCAATGTGTTAGTGTTTGTGTTAGTGCTTCATTGATCATGATTAGTATTAGTGCCTGTGGACTGGTGTGGGTTTTGGTTTTATCTTCCTGCTGGGTGCCAGATTTGAGTGACAGGTTGCTTGGATGGTTGTTGCGTTATGCATGCTGCTATATGGAGTCAGATCCTGTCAAAATTGCTGTGGAAGGTGTGGAAAGATTCAAGGAAGAAAACCATGATCTTATAATTGTTGATACCAGTGGGCGGCACAAACAAGAAGCATCCCTTTTTGAAGAAATGCGCCAACTTTCGGAAGCTACGAAACCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCTGCTTTTAATCAGGCCCAAGCATTCAAACAGAGTGTTGCTGTTGGAGCTGTAATTATCACCAAAATGGATGGCCATGCCAAGGGTGGTGGTTCTCTTAGCGCTGTTGCAGCAACAAAGAGTCCTGTCATATTCATAGGAACTGGTGAACATATGGATCAGTTTGAAGTATTTGAAGTTCAGCCGTTTGTTAGTCGTCTATTAGGCATGGGGGACTTGTCTGGGTTAATAGACAAAATTCATGGAGTTGTTCCAATGGATCAACAGGCTGATCTTGTTCAAAAACTGTCAAAAGGAAACTTCACCTTGAGGATTTTGTATGAGCAATTCCAGAACGCGCTTAAAATGGGTCCTATGGGCGAGTTAGCTTCTATGATTCCGGGATTTAGTTCTGAGTTAATACCACAAGGCCATGAGAATGAAAGCTCGGCAAAACTTAAGCGTTATATGACAATGATGGATTCAATGACAAATGAAGAGTTGGATAGTTCAAACCCAAAGCTCATTAACGAATCACGTATGATGCGAATAGCTCGAGGTTCTGGTCGTCTAGTTAGGGAAGTGTTGGAGTTGATGGAAGTTTACAAACATTTTGCAAAGACGTTCAATAAGCTATCTCAAAGTAGGAATCCACAGGACATGGTCAAATCCCTCTCTCCACATTTGCTGAAGCCATTTTGTGGCGTTAAAGAGTTTCAAAACATGATGAAGAAGATAGGAACTACTAACGACATGATGGGAGTGCTTGGTGGTGGTAGATAG 1623 0.414 MVLAELGGSITRALHKMNNTTVIDEKALTDCLNVINQTLLQSDVRFELIRDMQININNIVNLEQLAAGHNKRKIIQQESPVLFLKEEKQVLLCLLVYKGSFGLVCIALCLLFWHQQHYCHVRFGLGVTANSCPFYCFSSLSPIPRLVRYCTDISDRVSVSDTCDYIQSNYYRCQCVSVCVSASLIMISISACGLVWVLVLSSCWVPDLSDRLLGWLLRYACCYMESDPVKIAVEGVERFKEENHDLIIVDTSGRHKQEASLFEEMRQLSEATKPDLVIFVMDSSIGQAAFNQAQAFKQSVAVGAVIITKMDGHAKGGGSLSAVAATKSPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKGNFTLRILYEQFQNALKMGPMGELASMIPGFSSELIPQGHENESSAKLKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGRLVREVLELMEVYKHFAKTFNKLSQSRNPQDMVKSLSPHLLKPFCGVKEFQNMMKKIGTTNDMMGVLGGGR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04341 540 Gene3D - 223 345 IPR027417 -
Mepo6g04341 540 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 1 77 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mepo6g04341 540 Gene3D - 346 366 IPR042101 -
Mepo6g04341 540 Pfam SRP54-type protein, GTPase domain 223 356 IPR000897 GO:0005525|GO:0006614
Mepo6g04341 540 Pfam Signal peptide binding domain 387 488 IPR004125 GO:0006614|GO:0008312|GO:0048500
Mepo6g04341 540 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 1 77 IPR036225 -
Mepo6g04341 540 Pfam SRP54-type protein, helical bundle domain 6 78 IPR013822 GO:0005525|GO:0006614
Mepo6g04341 540 SUPERFAMILY Signal peptide-binding domain 358 492 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mepo6g04341 540 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 329 342 IPR000897 GO:0005525|GO:0006614
Mepo6g04341 540 Gene3D - 370 506 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mepo6g04341 540 Gene3D - 1 78 IPR042101 -
Mepo6g04341 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 358 IPR027417 -
Mepo6g04341 540 SMART SRP54_3 208 356 IPR000897 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04341 Mepo-Chr6 55406940 55410451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04341 K03106 - jre:109013924 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04341 6 55406940 55410451 Mepo6g04341 6 55406940 55410451 ECH
Mepo6g04341 6 55406940 55410451 Mepo2g00179 2 2012888 2019482 PCT