Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04294 ATGGAAGCAGCGCGGCGGCTGGTGTGGCGTTTACGTGCTTTTCCGAAGCCGGTGGTCTCAAACGGTGTCGTATCACACTCATCATCTTCATCTTCTAGTTGTAACATCAAAATTCAACTATCGAATACCAAATTTTGGAAGTTCGGTTCAACATTATCATCACCTTCTTCTTCAGAAACATCATTACTAAGGAAAACTGTGAATAAATTTCCCTACATTGTAAAAGCAGGTGATCCAGTTCTTCATGAGCCTGCACGTGAGGTTGATCACAGTGAGATTAAATCAGACAAGATTCAGAATATTATCGATGAAATGATTTTTGTCATGAGAAATGCCCCTGGAGTTGGTGTTGCTGCCCCACAAATTGGTATCTCCTTAAGGATAATAGTTTTGGAGGATAAAGAAGAATATATTAGTTACAACACAGAGGAGGAGACCAAAGCACAAGACAGAAGACCTTTTGATCTTTTGGTGATTCTGAATCCCAAATTAAAGAACAAGAGCAACAGGACTGCCTTCTTTTTTGAAGGGTGCTTGAGTGTTGATCGATTTCAAGCTGTGGTAGAGCGATACCTTGATGTTGAGGTTACAGGTTTTGATCGATATGGTGAGCCAATCAAAATAAATGCTTCTGGTTGGCAGGCTCGAATTTTACAGCATGAGTGTGATCACCTAGATGGAGCACTATATGTCGATAAGATGGTACCTAGAACTTTCAGAAGTTGGAAAAACGTGGATCTGCCTCTTGCCCATGGGTGCCCCAAACTTGGCCCCCGAGCGTAA 783 0.4189 MEAARRLVWRLRAFPKPVVSNGVVSHSSSSSSSCNIKIQLSNTKFWKFGSTLSSPSSSETSLLRKTVNKFPYIVKAGDPVLHEPAREVDHSEIKSDKIQNIIDEMIFVMRNAPGVGVAAPQIGISLRIIVLEDKEEYISYNTEEETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQAVVERYLDVEVTGFDRYGEPIKINASGWQARILQHECDHLDGALYVDKMVPRTFRSWKNVDLPLAHGCPKLGPRA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04294 260 PANTHER PEPTIDE DEFORMYLASE 64 250 IPR023635 GO:0042586
Mepo6g04294 260 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Mepo6g04294 260 SUPERFAMILY Peptide deformylase 70 242 IPR036821 -
Mepo6g04294 260 Hamap Peptide deformylase [def]. 69 245 IPR023635 GO:0042586
Mepo6g04294 260 PRINTS Peptide deformylase signature 188 206 IPR023635 GO:0042586
Mepo6g04294 260 PRINTS Peptide deformylase signature 176 187 IPR023635 GO:0042586
Mepo6g04294 260 PRINTS Peptide deformylase signature 207 236 IPR023635 GO:0042586
Mepo6g04294 260 PRINTS Peptide deformylase signature 103 132 IPR023635 GO:0042586
Mepo6g04294 260 FunFam Peptide deformylase 70 253 - -
Mepo6g04294 260 NCBIfam peptide deformylase 73 237 IPR023635 GO:0042586
Mepo6g04294 260 CDD Pep_deformylase 73 230 IPR023635 GO:0042586
Mepo6g04294 260 Gene3D Peptide deformylase 70 258 IPR036821 -
Mepo6g04294 260 Pfam Polypeptide deformylase 73 237 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04294 Mepo-Chr6 55030881 55035219 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04294 K01462 - cpap:110821001 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04294 6 55030881 55035219 Mepo6g04294 6 55030881 55035219 ECH
Mepo6g04294 6 55030881 55035219 Mepo2g00223 2 2523632 2527673 PCT