Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04260 ATGAAGAAACAATGTTTCAAAGAACCAGAAACAAGTCCAAACCAACAAGTAACTTTGGAATATTGTTGCTGGTTCGAAGATGCATGCATCCTTGACATGGATTGCTTCATTAAGACCCTTTCAAACATCAAACAAAAAGGTGTTCGTTCCGATTTAATTGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCATGACCTTGAAACTTCAAATTCAAATGTGAATTCACCTGAAAGTGTAACAACATCATGGATGAAGAAAAGGTTCTTTGTTGAAACCTTAGTCAGTGTTCTTCCACCAGACAAAGATTCCATTCCATGCAACTTCCTCCTTCGCCTTCTTAAAACAGCAAACATGGTTGCTGTTGAGTCTACTTATCGAACCGATCTTGAGAATCGAATTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTTAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTTAAGAGGTTTTTGAGTTTGGATCATGATGGAGTTAAAACTGGTGCTGCTTTGGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAGGTTGGTTTGGATGCTAATTTGAGTTTGTCTCAGTTTGTTGCACTTTCTGGTGCTCTTCCTAATCATGCAAGAGCTACTGATGATGGTTTGTATAGAGCCATTGACACTTATCTTAAAGCACATCCAAGCGTGTCGAAGCAAGAAAGAAAAAGTCTGTGTAGGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCTGTGCGAGCTGTTATTCAAGTTCTCTTCTCTGAACAAACAAAACTCAACCGTCACGTTGATTGGAGTGCTTCTTTCAGTAGCTTGAGGAGTCCAAGTGGATACGGTGGTGTGTTGGACCCACAGGCACGGTGTCTTTCTAAGCGTGAAATGAACACACAACAAATGGAGATAAAAAAACTGAAGGAAGACGTTTACAGGCTGCAAAGTCAGTGCAATGTCATGCAAGCACAGATGGAAAAGATGGCTGAGAAGAAGAAACGTTTCTTCAAATGGAAGAAACTTGCTTTTAGTAAAAGCATCGGAGAGATGGAGAATGTTGAACAAGATGAAGCTGAAACTGAATTTGGATTTGGAAGGCAAACCCCTATGGACATGAAAACTAGTACTGTGGTCAAAAGTAGGACTCCTCATAAGTGGAGAAAATCTCTGTCCTGA 1260 0.4056 MKKQCFKEPETSPNQQVTLEYCCWFEDACILDMDCFIKTLSNIKQKGVRSDLIGSIITHYASKWLHDLETSNSNVNSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLKTANMVAVESTYRTDLENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFLSLDHDGVKTGAALVKVAKLVDCYLAEVGLDANLSLSQFVALSGALPNHARATDDGLYRAIDTYLKAHPSVSKQERKSLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSASFSSLRSPSGYGGVLDPQARCLSKREMNTQQMEIKKLKEDVYRLQSQCNVMQAQMEKMAEKKKRFFKWKKLAFSKSIGEMENVEQDEAETEFGFGRQTPMDMKTSTVVKSRTPHKWRKSLS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04260 419 PANTHER OS12G0117600 PROTEIN 23 369 IPR043454 -
Mepo6g04260 419 ProSiteProfiles NPH3 domain profile. 22 289 IPR027356 -
Mepo6g04260 419 MobiDBLite consensus disorder prediction 386 419 - -
Mepo6g04260 419 Coils Coil 325 352 - -
Mepo6g04260 419 Pfam NPH3 family 23 265 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04260 Mepo-Chr6 54762046 54765602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04260 24 355 EF-hand Containing Proteins AT3G44820 31.016 2.52e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04260 - - gmx:100777820 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04260 6 54762046 54765602 Mepo6g04260 6 54762046 54765602 ECH
Mepo6g04260 6 54762046 54765602 Mepo2g00244 2 2818808 2821582 PCT