Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04108 ATGTGGAAGGTTCCATCATCATTGGTTCTTCTGCTACTTCTTCAGCTAGCATGTTCTCTTATTGGTTCTGTTATAGCTTCTGTGTCTTATGACTCTAAAGCTATCACCATTAATGGTCAAAGAAGGATCCTCATTTCTGGATCCATTCATTATCCAAGAAGTACTCCTGAGATGTGGCCAGATCTTATACAGAAGGCTAAAGAAGGAGGCTTGGATGTGATTCAGACTTATGTTTTTTGGAATGGACATGAACCTTCACCTGACAAATATTATTTTGAGGGGAACTATGATTTGGTGAAGTTCATAAAGTTGGTGCAGCAAGCTGGTCTTTATGTTCATCTAAGGATTGGTCCTTATGTTTGTGCTGAATGGAATTTTGGGGGTTTTCCTGTTTGGTTGAAGTACATTCCTGGTATCAGTTTTAGAACTGACAATGATCCATTTAAGTTTCAAATGCAAAAATTTACTGAGAAGATTGTTGATATGATGAAAGCAGAAAGGCTATTTGAGTCTCAGGGTGGTCCAATAATTATGTCTCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCTGGTAAATCCTACACTAAATGGGCAGCAGATATGGCTGTAGGACTTGGTACCGGAGTTCCGTGGATCATGTGCAAGCAAGATGATGCTCCCGATCCTGTTATTAACACCTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGATTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGATGGTTTACTGAGTTTGGAGGTCCGGTACCTCACCGACCTGCTGAAGACATGGCATTTTCAGTTGCAAGATTTATACAGAAAGGAGGATCATTTATCAATTATTACATGTATCATGGAGGAACAAATTTTGGTAGAACTGCTGGTGGTCCTTTCATTGCTACAAGCTATGACTATGATGCTCCTCTTGATGAATATGGATTGCTACGGCAACCAAAATGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTCCGAGCCTGCTTTAATTTCTGGAGATCCTATCGTTACACGGATCGGAAACTATCAAGAGGCTCATGTGTTTAAATCGAAGTCGGGAGCCTGTGCTGCATTTCTTGGAAACTATAATCCAAAAGCTTTTGCAACAGTAGCTTTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACCGTTTATAACACAGCAAGGGTTGGCTCTCAGAGTGCCCAGATGAAGATGAGTCGTGTTCCTATTCACGGTGGACTATCTTGGCAAGTGTTCACTGAACAAACAGCCTCTACTGATGATAGTTCATTCACCATGACCGGTCTACTAGAGCAGTTAAATACAACAAGAGATTTAACCGATTACTTGTGGTACTCCACAGATGTTGTGATTGATTCCAATGAAGGATTTTTGAGAAGTGGAAAGGATCCTGTTCTTACAGTGTTATCTGCAGGGCATGCTTTGCATGTTTTCGTCAATAGTCAGTTGTCAGGAACTATATATGGAAGCTTAGAATTCCCCAAGCTAACTTTTAGCCAAAATGTGAAGCTCATACCTGGTGTCAACAAAATATCTCTTCTAAGTGTTGCAGTTGGACTCCCGAATGTTGGCCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGACCGATTACATTAAATGGTCTCGATGAAGGTAGAAGGGACCTGTCTTGGCAGAAATGGTCTTACAAGGTTGGTCTCCATGGTGAAGCCTTGAGTCTTCATTCTCTCGGTGGAAGTTCCTCGGTCGAGTGGGTTCAGGGGAGTTTAGTTTCTCGTATGCAGCCATTGACTTGGTACAAAACTACCTTCGATGCCCCGGACGGAATTGCACCGTTTGCTTTAGACATGGGAAGTATGGGAAAAGGACAAGTGTGGTTAAATGGACAGAATCTTGGCCGTTACTGGCCTGCTTATAAAGCGTCCGGGACCTGTGATAACTGTGACTACGCAGGAACTTATAACGAGAATAAATGTAGAAGTAACTGCGGCGAGGCTTCTCAAAGATGGTACCATGTTCCTCATTCATGGCTGATACCAACTGGAAATTTATTGGTTGTGTTCGAAGAATTGGGTGGAGACCCTAATGGGATATTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTATAAGTTATCAGATGCAAACTTCTGGCAAAACTAACAAACCTGTGAGACCAAAAGCACATTTATCTTGTGGCCCTGGACAGAAAATATCATCGATCAAATTCGCTAGCTTTGGTACTCCAGTAGGGTCTTGTGGAAACTTTCATGAAGGAAGCTGTCATGCTCACAAGTCTTATAATACTTTTGAAAAGAATTGTGTTGGACAAAACTCATGCAAGGTAACTGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCATGAAGAAACTATCGGTCGAGGCCATTTGTACCTGA 2526 0.4141 MWKVPSSLVLLLLLQLACSLIGSVIASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPDKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNDPFKFQMQKFTEKIVDMMKAERLFESQGGPIIMSQIENEYGPMEYEIGAPGKSYTKWAADMAVGLGTGVPWIMCKQDDAPDPVINTCNGFYCDYFSPNKDYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLSEPALISGDPIVTRIGNYQEAHVFKSKSGACAAFLGNYNPKAFATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMSRVPIHGGLSWQVFTEQTASTDDSSFTMTGLLEQLNTTRDLTDYLWYSTDVVIDSNEGFLRSGKDPVLTVLSAGHALHVFVNSQLSGTIYGSLEFPKLTFSQNVKLIPGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLDEGRRDLSWQKWSYKVGLHGEALSLHSLGGSSSVEWVQGSLVSRMQPLTWYKTTFDAPDGIAPFALDMGSMGKGQVWLNGQNLGRYWPAYKASGTCDNCDYAGTYNENKCRSNCGEASQRWYHVPHSWLIPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQTSGKTNKPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNFHEGSCHAHKSYNTFEKNCVGQNSCKVTVSPENFGGDPCPNVMKKLSVEAICT 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04108 841 SUPERFAMILY (Trans)glycosidases 28 343 IPR017853 -
Mepo6g04108 841 SUPERFAMILY Galactose-binding domain-like 582 747 IPR008979 -
Mepo6g04108 841 CDD Gal_Rha_Lectin_BGal 758 840 - -
Mepo6g04108 841 Gene3D - 750 841 IPR043159 -
Mepo6g04108 841 Gene3D Glycosidases 24 344 - -
Mepo6g04108 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Mepo6g04108 841 FunFam Beta-galactosidase 591 732 - -
Mepo6g04108 841 FunFam Beta-galactosidase 292 420 - -
Mepo6g04108 841 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Mepo6g04108 841 FunFam Beta-galactosidase 446 583 - -
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Mepo6g04108 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Mepo6g04108 841 FunFam Beta-galactosidase 751 841 - -
Mepo6g04108 841 Gene3D - 603 732 - -
Mepo6g04108 841 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Mepo6g04108 841 PANTHER BETA-GALACTOSIDASE RELATED 18 742 IPR001944 GO:0004553|GO:0005975
Mepo6g04108 841 FunFam Beta-galactosidase 23 343 - -
Mepo6g04108 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04108 Mepo-Chr6 53258530 53263911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04108 9 841 Glycoside Hydrolase AT3G13750 79.352 0.0 1411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04108 - - gmx:100811187 1587.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04108 6 53258530 53263911 Mepo6g04108 6 53258530 53263911 ECH
Mepo6g04108 6 53258530 53263911 Mepo1g04283 1 50230591 50236951 PCT